Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30019
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107...    28   7.0  
03_06_0553 - 34682581-34683183,34683687-34683842,34684154-346842...    28   7.0  
06_01_0558 - 3968211-3969475,3970198-3970266,3970374-3970529,397...    28   9.2  
02_04_0266 - 21415912-21418563                                         28   9.2  
01_05_0657 + 24034198-24036306                                         28   9.2  

>10_08_1007 -
           22210263-22210400,22210506-22210547,22210626-22210727,
           22212239-22212337,22212413-22212473,22213311-22213432,
           22217700-22217786,22217958-22218041,22218141-22218220,
           22218404-22218467,22218904-22218972,22219099-22219179,
           22219626-22219694,22220108-22220140
          Length = 376

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 60  SGKSKTKTVVECLVFMLITCYVWSMFAA 143
           +G S+ + +V C   MLITCY+W +  A
Sbjct: 13  TGNSEIR-LVYCKQIMLITCYIWVLVEA 39


>03_06_0553 -
           34682581-34683183,34683687-34683842,34684154-34684272,
           34684691-34684793,34685027-34685299,34685411-34685602,
           34686691-34687029
          Length = 594

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 107 HEHETFNNCFCFAFTAP 57
           HEH  F++C C AF  P
Sbjct: 287 HEHHEFSSCTCLAFAPP 303


>06_01_0558 -
           3968211-3969475,3970198-3970266,3970374-3970529,
           3971075-3971405
          Length = 606

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 642 PDYATELNLQLCRFNVKFSRKVGSLTRPQGLGRSIKWV 755
           P +  E N+ L   +VK +  VGSL  P  + +++ W+
Sbjct: 336 PTWLLENNIYLSYLSVKHNSFVGSLILPSTVNQNLSWL 373


>02_04_0266 - 21415912-21418563
          Length = 883

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = -3

Query: 594 IVY*SSGDR*SKIFERRVESFVLMSKVSKFLKCEIPLPESPTRNQ*NSFVVAIL 433
           ++Y  S  R  + +ER + SF + +K+ + + C   +     R++ ++FVV +L
Sbjct: 646 VLYWMSEPRLGQSYERAIVSFDIAAKIFEVIPCPSSIAMWDPRSRCHAFVVELL 699


>01_05_0657 + 24034198-24036306
          Length = 702

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -2

Query: 580 VRRQVIEDLRASSGELRFNVKSIK 509
           V++ VI+ LR+S+G+L   VKS+K
Sbjct: 472 VKKAVIDTLRSSNGQLTNGVKSLK 495


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,605,046
Number of Sequences: 37544
Number of extensions: 292884
Number of successful extensions: 573
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)