Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30019
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56963-1|AAB38120.1|  161|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z70208-8|CAA94143.1|  196|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>U56963-1|AAB38120.1|  161|Caenorhabditis elegans Hypothetical
           protein T13A10.2 protein.
          Length = 161

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 100 CSC*SHVTCGRCSQQNSTTTYGT*KLPEC 186
           CSC  H  CG C ++ S+   G  K PEC
Sbjct: 115 CSC-LHTYCGACIREISSRHNGEMKCPEC 142


>Z70208-8|CAA94143.1|  196|Caenorhabditis elegans Hypothetical
           protein F54B11.8 protein.
          Length = 196

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +2

Query: 500 FRNFDTFDIKTKLSTRRSKIFDHLSPDD*YTIYTKSLMYSIVRCENSSRLRY 655
           ++NFD+F I    +  R++   ++  D   T+Y+       V CE   + R+
Sbjct: 36  WKNFDSFKIAILNAAARARATGNIRYDSRMTVYSHPATLQCVDCEEGVKKRF 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,353,019
Number of Sequences: 27780
Number of extensions: 292914
Number of successful extensions: 570
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)