Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30017
         (681 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565...    29   3.4  
09_02_0466 + 9599389-9599662,9600324-9600643,9600950-9601186,960...    29   4.5  
03_05_0736 - 27254502-27255497                                         29   4.5  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    28   6.0  
05_03_0353 - 12856385-12857705,12858007-12858959                       28   7.9  

>03_05_0845 -
           28155065-28155374,28156201-28156342,28156375-28156505,
           28156591-28156784,28156859-28156969,28157234-28157399,
           28157501-28157668,28157766-28158787
          Length = 747

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 598 EXEGIKVKGFYEYVGPDGVTYRVDYTGD 681
           E  G +++G   +VGPDG TYR  +  D
Sbjct: 90  EFRGGRIEGQGVFVGPDGATYRGAWAAD 117


>09_02_0466 +
           9599389-9599662,9600324-9600643,9600950-9601186,
           9601278-9601445,9601778-9601966
          Length = 395

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +1

Query: 424 TPTYVASKVVPPSGAGYDYKYGIIRYDNDVVPEGYHYLYETENKILAEEAGKVENVGTEX 603
           +P   A++  PPSGAG DY       D   V E   +    E + +    G V  +    
Sbjct: 76  SPPRAAARPSPPSGAGVDYDSTATIIDGKSVAEDIRFQIAEEVRQMKNAVGHVPGLAVVL 135

Query: 604 EG 609
            G
Sbjct: 136 VG 137


>03_05_0736 - 27254502-27255497
          Length = 331

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +2

Query: 518 LKATTTCTRPR--TRFSLKKPARSRTLAPXTKASRS 619
           + ATTT + P+  T+F+L + ARS T  P +K+  S
Sbjct: 12  MHATTTLSSPQLCTQFALDRVARSTTTIPLSKSKSS 47


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 460 WVGPPCWQRMWVWP 419
           W    CWQRMWV P
Sbjct: 14  WPTASCWQRMWVHP 27


>05_03_0353 - 12856385-12857705,12858007-12858959
          Length = 757

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 399 GCDWHGNGRLHDGQGNNAGSLVSITKVFAEVL 304
           GC+W   G    GQ   A S VS T    E+L
Sbjct: 172 GCEWSDPGFFLRGQEEEASSSVSTTTAMEEIL 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,872,728
Number of Sequences: 37544
Number of extensions: 292060
Number of successful extensions: 704
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)