SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30015X
         (520 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782...   177   6e-45
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32...   176   8e-45
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137...   175   2e-44
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323...   174   4e-44
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731...   174   4e-44
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585...   172   1e-43
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910...   171   4e-43
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054...   171   4e-43
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306...   158   2e-39
12_02_1282 + 27528159-27529148,27529549-27529614                       97   6e-21
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207...    79   2e-15
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324...    77   9e-15
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931...    69   2e-12
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160...    62   2e-10
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182...    61   6e-10
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980...    60   1e-09
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981...    55   4e-08
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238...    47   8e-06
08_02_0701 + 20177860-20178603                                         29   1.7  
02_05_0733 + 31309835-31310434,31314138-31314254,31314364-313148...    29   1.7  
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937...    29   3.0  
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485...    28   3.9  
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245...    28   5.2  

>01_07_0285 -
           42476767-42476832,42476990-42477603,42477821-42478214,
           42478301-42478360
          Length = 377

 Score =  177 bits (430), Expect = 6e-45
 Identities = 79/90 (87%), Positives = 86/90 (95%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWISKDEYDESGPAIVHRKCF 377


>05_01_0047 -
           323097-323162,323287-323900,324233-324626,324718-324777
          Length = 377

 Score =  176 bits (429), Expect = 8e-45
 Identities = 79/90 (87%), Positives = 86/90 (95%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWISKDEYDESGPAIVHRKCF 377


>03_06_0585 -
           34912159-34912224,34912634-34913247,34913350-34913734,
           34913824-34913883
          Length = 374

 Score =  175 bits (425), Expect = 2e-44
 Identities = 79/90 (87%), Positives = 85/90 (94%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 285 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 344

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 345 LASLSTFQQMWISKGEYDESGPSIVHRKCF 374


>12_01_0409 -
           3230853-3230918,3231372-3231994,3232454-3232847,
           3233000-3233059
          Length = 380

 Score =  174 bits (423), Expect = 4e-44
 Identities = 78/90 (86%), Positives = 85/90 (94%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 291 DVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 350

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 351 LASLSTFQQMWISKAEYDESGPAIVHRKCF 380


>03_05_0926 +
           28871800-28871859,28871943-28872336,28872586-28873199,
           28873281-28873346
          Length = 377

 Score =  174 bits (423), Expect = 4e-44
 Identities = 78/90 (86%), Positives = 85/90 (94%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWIAKAEYDESGPSIVHRKCF 377


>05_04_0450 -
           21356877-21356942,21357482-21358095,21358173-21358566,
           21358648-21358704
          Length = 376

 Score =  172 bits (419), Expect = 1e-43
 Identities = 77/90 (85%), Positives = 85/90 (94%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGG+TM+PGIADRM KEIT+LAPS++K+K+IAPPERKYSVWIGGSI
Sbjct: 287 DVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSI 346

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK EYDESGPGIVH KCF
Sbjct: 347 LASLSTFQQMWISKGEYDESGPGIVHMKCF 376


>10_08_0597 +
           19089616-19089675,19089789-19090182,19090451-19091064,
           19091160-19091225
          Length = 377

 Score =  171 bits (415), Expect = 4e-43
 Identities = 76/90 (84%), Positives = 85/90 (94%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWIS+ EY+ESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWISRAEYEESGPAIVHRKCF 377


>01_06_1455 +
           37504175-37504231,37504357-37504750,37504865-37505478,
           37506021-37506086
          Length = 376

 Score =  171 bits (415), Expect = 4e-43
 Identities = 76/90 (84%), Positives = 83/90 (92%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGG+TM+PGI DRM KEITALAP ++KIK++APPERKYSVWIGGSI
Sbjct: 287 DVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSI 346

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK EYDESGPGIVH KCF
Sbjct: 347 LASLSTFQQMWISKAEYDESGPGIVHMKCF 376


>11_01_0403 +
           3059650-3059709,3059807-3060200,3060275-3060930,
           3060979-3061044
          Length = 391

 Score =  158 bits (384), Expect = 2e-39
 Identities = 78/104 (75%), Positives = 85/104 (81%), Gaps = 14/104 (13%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347

Query: 340 LASLSTFQ--------------QMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQ              QMWISK EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391


>12_02_1282 + 27528159-27529148,27529549-27529614
          Length = 351

 Score = 97.5 bits (232), Expect = 6e-21
 Identities = 54/90 (60%), Positives = 59/90 (65%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK                 
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK----------------- 330

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
                    MWI+K EYDESGP IVHRKCF
Sbjct: 331 ---------MWIAKAEYDESGPSIVHRKCF 351


>08_01_0254 +
           2078380-2078392,2078487-2078578,2079579-2079698,
           2079924-2080097,2080184-2080257,2080847-2080927,
           2081306-2081366,2081437-2081486,2082278-2082332,
           2082599-2082676,2082757-2082810,2083703-2083756,
           2083846-2083906,2084229-2084280,2085118-2085184,
           2085393-2085452,2085546-2085608,2085752-2085814,
           2086337-2086401,2086620-2086688,2086742-2086847
          Length = 503

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 36/79 (45%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIG 350
           DVDIRK+L ++ ++SGG++    + +R++KE+   +    ++K++A     ER++SVWIG
Sbjct: 391 DVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIG 450

Query: 349 GSILASLSTFQQMWISKEE 293
           GSILASL +FQQMW SK +
Sbjct: 451 GSILASLGSFQQMWFSKAD 469


>03_06_0192 +
           32230953-32231030,32231130-32231485,32232250-32232425,
           32233857-32234038,32234260-32234443,32235192-32235259,
           32235343-32235495
          Length = 398

 Score = 77.0 bits (181), Expect = 9e-15
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
 Frame = -1

Query: 514 DIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE------RKYSVWI 353
           +  + L  NT++ GGT    G  DR Q+E   L+ S I   ++ PPE       +YS W+
Sbjct: 306 EYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWL 364

Query: 352 GGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           GG+ILA +   Q   ++K +YDE+GP IVH+KCF
Sbjct: 365 GGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398


>01_01_1170 -
           9318332-9318461,9318551-9318613,9318694-9318744,
           9318837-9318921,9319005-9319068,9319139-9319340,
           9319808-9320502
          Length = 429

 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 30/83 (36%), Positives = 49/83 (59%)
 Frame = -1

Query: 499 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 320
           L+   +++GG+T++P   +R++KE+  L P   ++KIIA  +     W GGS+LA    F
Sbjct: 346 LFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDF 405

Query: 319 QQMWISKEEYDESGPGIVHRKCF 251
           + M I+K EY+E G     R+ F
Sbjct: 406 ESMCITKSEYEEMGSMRCRRRFF 428


>08_01_0194 -
           1603702-1603782,1603970-1604062,1604203-1604328,
           1604403-1604513,1604989-1605108,1605665-1605757,
           1606024-1606157,1606503-1606530,1606821-1607075,
           1607167-1607401,1608147-1608193
          Length = 440

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
 Frame = -1

Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAP--------------STIKIKIIAP 380
           +D R+DLY N V+SGG+TM+     R+Q +I  +                  +++ ++A 
Sbjct: 333 IDTRRDLYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAH 392

Query: 379 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 269
           P + Y+ W GGS+ AS   F +   +KEEY+E G  I
Sbjct: 393 PIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429


>04_04_1515 +
           34117383-34117732,34117833-34117918,34118227-34118297,
           34118457-34118524,34118692-34118753,34119010-34119107,
           34119545-34119626,34119935-34120077,34120233-34120381,
           34120461-34120594,34120714-34120832,34120926-34121014,
           34121398-34121515
          Length = 522

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 29/85 (34%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
 Frame = -1

Query: 496 YANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLST 323
           Y   V+SGG++  PG+++R++KE+  L P+ I   I++I PP    S W G  +++++ST
Sbjct: 398 YKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVST 457

Query: 322 FQQMW-ISKEEYDE----SGPGIVH 263
           F + W I K+++ +    +GP  V+
Sbjct: 458 FTEAWCIKKKQFRQKTRRNGPSFVN 482


>02_04_0473 +
           23197294-23197340,23197443-23197680,23197792-23198016,
           23198616-23198762,23198827-23198961,23199415-23199507,
           23199925-23200044,23200303-23200413,23200486-23200611,
           23200731-23200829,23201024-23201104
          Length = 473

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
 Frame = -1

Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----------------IKIKII 386
           +D R+ LY N V+SGG+TM+     R+Q+++  +  +                 I++ ++
Sbjct: 364 IDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVV 423

Query: 385 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 269
           + P ++Y+VW GGS+LAS + F +   +K EY+E G  I
Sbjct: 424 SHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462


>08_02_0441 -
           17196352-17196536,17196780-17196906,17198018-17198101,
           17198282-17198348,17198575-17198633,17199211-17199336,
           17199406-17199474,17199545-17199653,17199692-17199760,
           17199876-17199979,17200518-17200567,17200696-17200774,
           17200867-17200938,17201083-17201217,17201311-17201421,
           17202088-17202129
          Length = 495

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 11/75 (14%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPE 374
           D+D R  LY + V+SGG+TMYPG+  R++KE+        L  +      ++++I  PP 
Sbjct: 316 DIDNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPR 375

Query: 373 RKYSVWIGGSILASL 329
           RK+ V++GG++LA +
Sbjct: 376 RKHMVYLGGAVLAGI 390


>01_01_0292 -
           2387653-2387711,2388061-2388684,2388814-2389104,
           2389338-2389390,2390496-2390968,2391090-2391432,
           2391793-2391911,2392081-2392512,2392657-2392747,
           2392833-2392942,2393681-2393875,2394581-2394622,
           2395144-2395268,2395856-2395926,2396047-2396147
          Length = 1042

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 22/88 (25%), Positives = 43/88 (48%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           D  +++ L  + +++GG ++ PG+  R++  I    P    +K++   +     W G + 
Sbjct: 615 DEAVKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAA 674

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRK 257
            A+ S F +   S  +Y E G  + HRK
Sbjct: 675 FAASSKFGRHTFSLADYREHGENLFHRK 702


>08_02_0701 + 20177860-20178603
          Length = 247

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -3

Query: 443 QDAEGDHRPRALDHQDQDHRSPREEVLRMDR--WIHPGFPVHLPAD 312
           QD E D      D+ D+DHRSP+ +  R DR    + G P H+  D
Sbjct: 200 QDKEDDDDQGGGDYPDEDHRSPKRK-RRYDRGPCYNCGEPGHIARD 244


>02_05_0733 +
           31309835-31310434,31314138-31314254,31314364-31314806,
           31316831-31317137
          Length = 488

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 494 RQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPR 375
           R  RHV   HH+     +    DH  R L +  ++ R PR
Sbjct: 282 RLPRHVEEMHHLRHVEERRLPYDHEERRLPYDHEERRRPR 321


>11_03_0057 +
           9375083-9375088,9375904-9376031,9376107-9376166,
           9376832-9376892,9377434-9377583,9377667-9377822,
           9377905-9378116,9378572-9378673,9378785-9378924,
           9379781-9379932
          Length = 388

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 463 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 332
           MYP   D  +K+   L     K    APPER+++     S+L S
Sbjct: 255 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYS 298


>05_03_0235 -
           10747649-10748118,10748226-10748314,10748477-10748574,
           10748934-10749046,10749107-10749200,10749557-10749589,
           10749734-10749851,10750110-10750210,10751036-10751233,
           10751337-10751471,10751752-10751830,10753650-10753738,
           10753835-10753987,10754100-10754285
          Length = 651

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = -3

Query: 518 RRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRP--RALDHQDQDHRSP 378
           RRH  G  R HRH    HH  R+R   + GDH        HQ + H  P
Sbjct: 528 RRHQKG--RHHRH----HHDHRHRHGHSHGDHHHHYHGGHHQRRRHHHP 570


>05_01_0311 +
           2452230-2452232,2452401-2452809,2454136-2454263,
           2455287-2455436,2455526-2455681,2455775-2455986,
           2456306-2456407,2456517-2456653,2456769-2457055
          Length = 527

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 463 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYS 362
           MYP   D  +K+   L     K    APPER+++
Sbjct: 350 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,951,329
Number of Sequences: 37544
Number of extensions: 268619
Number of successful extensions: 769
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -