Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30015X
(520 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 174 3e-44
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 174 3e-44
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 174 3e-44
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 174 3e-44
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 173 6e-44
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 173 6e-44
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 169 1e-42
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 169 1e-42
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 158 2e-39
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 148 2e-36
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 133 8e-32
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 129 1e-30
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 101 2e-22
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 80 1e-15
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 68 3e-12
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 68 4e-12
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 58 5e-09
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 48 4e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 2e-04
At5g43500.2 68418.m05318 expressed protein 40 0.001
At5g43500.1 68418.m05319 expressed protein 40 0.001
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.7
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 7.6
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 7.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 174 bits (423), Expect = 3e-44
Identities = 78/90 (86%), Positives = 85/90 (94%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 174 bits (423), Expect = 3e-44
Identities = 78/90 (86%), Positives = 85/90 (94%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 174 bits (423), Expect = 3e-44
Identities = 78/90 (86%), Positives = 85/90 (94%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 174 bits (423), Expect = 3e-44
Identities = 78/90 (86%), Positives = 85/90 (94%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 173 bits (421), Expect = 6e-44
Identities = 78/90 (86%), Positives = 85/90 (94%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 348 LASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 173 bits (421), Expect = 6e-44
Identities = 78/90 (86%), Positives = 85/90 (94%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 348 LASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 1e-42
Identities = 76/90 (84%), Positives = 83/90 (92%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 1e-42
Identities = 76/90 (84%), Positives = 83/90 (92%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 348 LASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 158 bits (383), Expect = 2e-39
Identities = 70/90 (77%), Positives = 79/90 (87%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSI
Sbjct: 289 DVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSI 348
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 349 LASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 148 bits (359), Expect = 2e-36
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
D DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSI
Sbjct: 240 DDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSI 299
Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
LASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 300 LASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 133 bits (321), Expect = 8e-32
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = -1
Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSIL 338
VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSIL
Sbjct: 278 VDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSIL 337
Query: 337 ASLSTFQQMWISKEEYDESGPGIVHRKC 254
ASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 338 ASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 129 bits (312), Expect = 1e-30
Identities = 60/74 (81%), Positives = 68/74 (91%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
DVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSI
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 340 LASLSTFQQMWISK 299
LASLSTFQQ+ I +
Sbjct: 348 LASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 101 bits (243), Expect = 2e-22
Identities = 43/92 (46%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIG 350
DVDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIG
Sbjct: 349 DVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIG 408
Query: 349 GSILASLSTFQQMWISKEEYDESGPGIVHRKC 254
GSILASL +FQQMW SK EY+E G + RKC
Sbjct: 409 GSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.8 bits (188), Expect = 1e-15
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = -1
Query: 505 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGS 344
+ L NTV+ GGTT G R QKE L S I+ ++ PPE YS W+GG+
Sbjct: 274 RQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGA 332
Query: 343 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 251
ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 333 ILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 68.1 bits (159), Expect = 3e-12
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 12/93 (12%)
Frame = -1
Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPE 374
D+D R LY + V+SGG+TMYPG+ R++KEI T L + ++++I PP
Sbjct: 287 DIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPR 346
Query: 373 RKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 278
RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 347 RKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 67.7 bits (158), Expect = 4e-12
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -1
Query: 499 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 320
LY + +++GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F
Sbjct: 338 LYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDF 397
Query: 319 QQMWISKEEYDESGPGIVHRKCF 251
+ M ++K EY+E G R+ F
Sbjct: 398 ESMCVTKAEYEELGSARCRRRFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 57.6 bits (133), Expect = 5e-09
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Frame = -1
Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI----------------KIKII 386
+D R+ LY N V+SGG+TM+ R+Q+++ + + + ++ ++
Sbjct: 318 IDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVV 377
Query: 385 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 269
+ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 378 SHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = -1
Query: 496 YANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLST 323
+ V++GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 322 FQQMW-ISKEEY 290
F W I+++++
Sbjct: 452 FPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = -1
Query: 514 DIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 335
++ + L ++ +M+GG ++ PG+ +R++ I + P I ++ + W G S A
Sbjct: 632 ELEERLTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFA 691
Query: 334 SLSTFQQMWISKEEYDESG 278
+ F +K +YDE G
Sbjct: 692 ANLNFLGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = -1
Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIG 350
+D+R+ L+++ + GG + G+ +++ + P T I + + E ++ W G
Sbjct: 476 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 535
Query: 349 GSILASLSTFQQMWISKEEYDESG 278
G+IL L ++ WI + ++ +G
Sbjct: 536 GAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = -1
Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIG 350
+D+R+ L+++ + GG + G+ +++ + P T I + + E ++ W G
Sbjct: 488 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 547
Query: 349 GSILASLSTFQQMWISKEEYDESG 278
G+IL L ++ WI + ++ +G
Sbjct: 548 GAILGILDFGREAWIERHQWMVNG 571
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 440 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 327
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 484 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 386
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 484 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 386
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,722,649
Number of Sequences: 28952
Number of extensions: 186321
Number of successful extensions: 567
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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