Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30014X
(538 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 188 5e-49
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 182 4e-47
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 136 3e-33
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 135 5e-33
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 105 3e-24
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 30 0.25
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 30 0.25
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 27 2.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 3.1
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 26 3.1
SPAC12B10.15c |||ribonuclease H2 complex subunit|Schizosaccharom... 26 4.1
SPBC19C7.08c |||leucine carboxyl methyltransferase|Schizosacchar... 25 5.4
SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ... 25 7.2
SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 7.2
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 25 7.2
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 25 7.2
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 25 9.5
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 9.5
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 188 bits (458), Expect = 5e-49
Identities = 99/171 (57%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IG+LDIAG EIF+ N FEQLCIN+TNEKLQQ FNHHM +LEQEEY +E I W FIDFG D
Sbjct: 441 IGILDIAGFEIFEKNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYMKEEIVWDFIDFGHD 500
Query: 185 LQNCIDLIEK--PMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQ 358
LQ IDLIEK P+GILS L+EE + PKATD TF KL+ KS LK KP K Q
Sbjct: 501 LQPTIDLIEKANPIGILSCLDEECVMPKATDATFTSKLDALWRNKS---LKYKPFKFADQ 557
Query: 359 AAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVEIFADH 511
F + HYA V Y+ GWLEKN DPLN+ V + NK + +F+D+
Sbjct: 558 G--FILTHYAADVPYSTEGWLEKNTDPLNENVAKLLAQSTNKHVATLFSDY 606
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 182 bits (442), Expect = 4e-47
Identities = 99/180 (55%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGVLDIAG EIF +N FEQLCINFTNEKLQQ FNH+M +LEQEEY +E IEW FID+G D
Sbjct: 454 IGVLDIAGFEIFTFNSFEQLCINFTNEKLQQFFNHYMFVLEQEEYTQERIEWDFIDYGND 513
Query: 185 LQNCIDLIEK--PMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQ 358
LQ ID IEK P+GI S L+E+ + P ATD TF EKL+ GKS Y K G
Sbjct: 514 LQPTIDAIEKSEPIGIFSCLDEDCVMPMATDATFTEKLHLLFKGKSDIYRPKKFSSEG-- 571
Query: 359 AAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVEIFADHPGQSGDASG 538
F + HYAG V Y+ WLEKNKDPLN + K N + +F D+ S +ASG
Sbjct: 572 ---FVLKHYAGDVEYDTKDWLEKNKDPLNACLAALMFKSTNSHVSSLFDDY---SSNASG 625
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 136 bits (328), Expect = 3e-33
Identities = 69/162 (42%), Positives = 95/162 (58%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGV+DI G E F+ N EQ CIN+ NEKLQQ FN H+ LEQEEY +EG++W I++ D
Sbjct: 435 IGVVDIYGFEHFEKNSMEQFCINYANEKLQQEFNKHVFKLEQEEYVKEGLDWRLIEYS-D 493
Query: 185 LQNCIDLIEKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQAA 364
Q CI LIE +GILS+L+EE P Q+F++KLNN K + + K K
Sbjct: 494 NQGCISLIEDKLGILSLLDEECRLPSGNHQSFLQKLNNQLPTKHSQFYK----KSRFNDG 549
Query: 365 HFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLL 490
F + HYA V Y + +L KN D + D + + +N+ +
Sbjct: 550 SFMVKHYALDVSYQVHDFLAKNSDAIPDEFISLLQNSKNEFI 591
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 135 bits (326), Expect = 5e-33
Identities = 71/154 (46%), Positives = 94/154 (61%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGVLDI G E F N FEQ CIN+ NEKLQQ F H+ LEQEEY EG+ W++ID+ D
Sbjct: 453 IGVLDIYGFEHFKKNSFEQFCINYANEKLQQEFYRHVFKLEQEEYAAEGLNWSYIDY-QD 511
Query: 185 LQNCIDLIEKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQAA 364
Q CI +IE +GILS+L+EE P +D+ +V KLN+ S P K K
Sbjct: 512 NQQCISMIESRLGILSLLDEECRMPTNSDENWVSKLND---AFSKPEFKNSYQKSRFGNK 568
Query: 365 HFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQF 466
F I HYA V Y G+++KN+D ++D +++ F
Sbjct: 569 EFTIKHYALDVVYCAEGFIDKNRDTISDELLELF 602
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 105 bits (253), Expect = 3e-24
Identities = 68/172 (39%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IG+LDI G EIF+ N FEQLCIN+ NEKLQQIF EQEEY RE I WT I + +
Sbjct: 410 IGILDIYGFEIFENNSFEQLCINYVNEKLQQIFIELTLKTEQEEYVREQIAWTPIKYFNN 469
Query: 185 LQNCIDLIE--KPMGILSILEE----ESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPK 346
C DLIE +P G+ + + + A D F ++LN S P+ + + +
Sbjct: 470 KVVC-DLIESKRPPGLFAAMNDAIATAHADSAAADSAFAQRLN---FLSSNPHFEQRQNQ 525
Query: 347 PGCQAAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVEIF 502
F + HYAG V Y+ITG +KNKD L +++ N+ + IF
Sbjct: 526 -------FIVKHYAGDVTYSITGMTDKNKDQLATDILNLIHSSNNEFMKSIF 570
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 29.9 bits (64), Expect = 0.25
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 271 VSGFREHRLFLKNGEDTHRLFNKVNAILQ 185
+ G R+H FLK D ++FN++ IL+
Sbjct: 210 IQGVRDHGCFLKEAGDAKKVFNRIFEILE 238
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 29.9 bits (64), Expect = 0.25
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = +2
Query: 236 LEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQAAHFAIGHYAGYVGYNITG 415
LEE + + Q+ ++L H G+ +L+ K K Q +HF + G GY +
Sbjct: 120 LEEFTACTSSLKQSKQKRLWKEHCGRERAFLRKKRTK--IQCSHFDLLVKLGQGGYG-SV 176
Query: 416 WLEKNKDPLNDTVVDQFKKGQNKLLVEI 499
WL K ++ + KK + L E+
Sbjct: 177 WLAKKRNTHELLAMKMMKKSTLQQLNEV 204
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 2.3
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 167 IDFGMDLQNCIDLIEKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPK 346
I ++ +N L K GI +L + + +T + LN + + S P PKPP
Sbjct: 479 IGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVVMSKPAGGPKPPG 538
Query: 347 P 349
P
Sbjct: 539 P 539
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +2
Query: 257 PKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQAAHFAIGHY 385
PK + F E SAP + P P + +A H GH+
Sbjct: 36 PKDFYEKFGEDFIREQEESSAPLMNPVPERDEAEAPHHPKGHH 78
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -1
Query: 193 ILQVHAKINESPFNAFALVLLLLEQGHVMVKDLLQFLVCEVNAELLKTVVVEN 35
+L V A N + ++A + L L + VK LL+ L+C + ++ T V+EN
Sbjct: 743 LLHVSAS-NNAIWSAGEMALQLGKDMQQWVKPLLERLICILKSKKSNTTVLEN 794
>SPAC12B10.15c |||ribonuclease H2 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 65 CINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMDLQ-NC 196
CIN T EK+ +M E+++++R +EW I F ++ NC
Sbjct: 101 CINSTFEKVMLWNRDNMRSSEKDQWKRGVLEW--IQFASKVKFNC 143
>SPBC19C7.08c |||leucine carboxyl
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 681
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 119 LLEQEEYQREGIEWTFIDFGMDLQNCIDLIEKPMGILSILEEESMFPKATDQTFVEKLNN 298
LL EY + + + +D+ ++N + +I + SI+ E+ F D T + N
Sbjct: 102 LLSSHEYNTDDVVFYDVDYPETIENRVQMIRSDSFLSSIVLEDKEFD--LDGTEIHTKNY 159
Query: 299 NHLG 310
+ G
Sbjct: 160 HSFG 163
>SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 331 LQVRSRFAQVVVVQLLNEGLVSGFREHR 248
L +RS+F + ++ LLN GL+ G + +R
Sbjct: 13 LLLRSKFVLISLILLLNLGLLLGIQIYR 40
>SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 25.0 bits (52), Expect = 7.2
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = -1
Query: 343 GGFGLQVRSRFAQVVVVQLLNEGLVSGFREHRLFLKNGEDTHRLFNKVNAILQVHAKINE 164
G F L ++ +F++V +L+N+GL +L KN + +F + + ++ I+
Sbjct: 186 GEFALTLKLQFSKVS--RLINQGLTPLLSRLQLIDKNIKIVGAIFGIILLLFRLKKYISH 243
Query: 163 SPFNAFA 143
S +AF+
Sbjct: 244 SKKSAFS 250
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 256 PESH*PDLR*EAEQQPLGQ 312
PE+H PDL E PLGQ
Sbjct: 107 PETHNPDLNIETGAGPLGQ 125
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -1
Query: 202 VNAILQVHAKINESPFNAFALVLLLLEQGHVMVKDLLQFLVCEVNAELLKTV 47
VN + IN++P AL L++ HV ++ L + + + ELL V
Sbjct: 2703 VNVLSMAIGNINDAPVRLNAL---LMDNAHVSLRRLFELVKNHYSQELLSQV 2751
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -2
Query: 345 LGGLGFK*GADLPKWLLFSFSTKVWSVAFGNIDSSSRMERIPIGFSIRSMQFC 187
+G G K + ++FS + ++ + G IDS+++ R+ I + R+ C
Sbjct: 1057 IGNYGEKLNREAENPIIFSRTEYLYVQSLGFIDSTTKERRLTIDYLDRNCVTC 1109
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 80 NEKLQQIFNHHMSLLEQEEYQREGIE 157
+E+L +FN +LLE +E RE +E
Sbjct: 549 HEQLSGVFNQIANLLENKEKSRELLE 574
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,172,838
Number of Sequences: 5004
Number of extensions: 43275
Number of successful extensions: 154
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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