Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30012X
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   2.8  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   6.6  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   6.6  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   6.6  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 485 SFTEPERYRAIDLFLMIFAIPITSSREMLP 396
           +F  PER  AIDL  +  ++  T+  E+LP
Sbjct: 165 TFVTPERKSAIDLTFVSQSLMETTGWEVLP 194


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 236 RPQVTGRVSRSLCS*QFKTDKPR*LLFPMQQPLSSE 343
           RP  +G    S+   Q KTDKPR L  P   PL +E
Sbjct: 108 RPAYSGNSDPSMD--QVKTDKPRELYIP---PLPTE 138


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 202 LSPKKVGDDIAKATSDW 252
           L PKK+ D  AK   DW
Sbjct: 200 LPPKKIKDPEAKKPEDW 216


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 187 SIPLGLSPKKVGDDIAKATSDWKGLKIT 270
           +I + + PKK+ D++A    D  G+K+T
Sbjct: 380 AIGVHVLPKKLDDEVAALHLDKLGVKLT 407


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,779
Number of Sequences: 2352
Number of extensions: 13248
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)