Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30010
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 259 1e-69
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 259 1e-69
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 258 2e-69
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 58 7e-09
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 55 7e-08
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.95
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 29 2.9
02_05_0602 + 30283893-30284170,30286259-30286305,30286534-302875... 29 2.9
11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513 29 5.1
11_06_0266 - 21791757-21792982,21793154-21793178 28 6.7
11_01_0355 + 2679561-2680985,2681183-2682295 28 6.7
09_04_0719 + 19716536-19716857,19716949-19717101,19717493-197177... 28 6.7
06_01_0486 - 3455030-3455770 28 6.7
03_04_0243 + 19298293-19299117 28 6.7
11_06_0271 - 21804629-21805836,21805997-21806015 28 8.8
02_01_0152 - 1070249-1070296,1070443-1070515,1070601-1070671,107... 28 8.8
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 259 bits (635), Expect = 1e-69
Identities = 130/226 (57%), Positives = 166/226 (73%), Gaps = 2/226 (0%)
Frame = +3
Query: 63 REDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTMMR 242
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 243 KAIKDHLDN--NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
+ IK H DN N +L+P + GNVGL+FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
VV+P NTGL P +T FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183
Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 734
PFSYGLV VYDSG++F+PE+LD+ EDL KF +GV+ VA++S
Sbjct: 184 RPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVS 229
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 259 bits (635), Expect = 1e-69
Identities = 130/226 (57%), Positives = 166/226 (73%), Gaps = 2/226 (0%)
Frame = +3
Query: 63 REDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTMMR 242
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 243 KAIKDHLDN--NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
+ IK H DN N +L+P + GNVGL+FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
VV+P NTGL P +T FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183
Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 734
PFSYGLV VYDSG++F+PE+LD+ EDL KF +GV+ VA++S
Sbjct: 184 RPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVS 229
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 258 bits (633), Expect = 2e-69
Identities = 129/226 (57%), Positives = 166/226 (73%), Gaps = 2/226 (0%)
Frame = +3
Query: 63 REDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTMMR 242
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 243 KAIKDHLDN--NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
+ IK H DN N +L+P + GNVGL+FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
VV+P NTGL P +T FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183
Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 734
PFSYGLV VYDSG++F+PE+LD+ +DL KF +GV+ VA++S
Sbjct: 184 RPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVS 229
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 58.0 bits (134), Expect = 7e-09
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Frame = +3
Query: 21 KFHRSPYATLSRMGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLR 200
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 201 GSS-IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENK 374
SS I L GK M + D L KL ++G+ GL FT +V E +
Sbjct: 63 SSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFE 122
Query: 375 VQAPARPGAIAPLSVVIPAHNTGLGP*KTY------FFQALSIPTKISKGTIEIINDVHI 536
AR G+I +V + GP + + F + +P +++KG +E++ D +
Sbjct: 123 EHDFARTGSIVTETVELKE-----GPLEQFTHEMEPFLRKQGLPVRLNKGAVELVADHIV 177
Query: 537 LKPGDKVGASEATLLNMLNISPFSYGL 617
+ G + A L +L + ++ L
Sbjct: 178 CEEGKPISPEAAQTLRLLGMQMATFRL 204
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 54.8 bits (126), Expect = 7e-08
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 12/212 (5%)
Frame = +3
Query: 33 SPYATLSRMGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSS- 209
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 210 IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAP 386
I L GK M + D L KL ++G+ GL FT +V E +
Sbjct: 203 IFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDF 262
Query: 387 ARPGAIAPLSVVIPAHNTGLGP*KTY------FFQALSIPTKISKGTIEIINDVHILKPG 548
AR G+IA +V + GP + + F + +P +++KG +E++ D + + G
Sbjct: 263 ARTGSIATETVELKE-----GPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEG 317
Query: 549 DKVGASEA-TLLNM---LNISPFSYGLVGKQV 632
+ A TL+ + +NI L+G Q+
Sbjct: 318 KPISPEAAQTLIGIFDDVNIVTKPMRLLGMQM 349
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.1 bits (67), Expect = 0.95
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +3
Query: 273 PALEK-LLPHIKGN---VGLVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 431
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 343 LRSVTNCWRTKSRLQLVPVPLP 408
LR+V WR+ +RLQ +P PLP
Sbjct: 428 LRAVCRPWRSNARLQPLPPPLP 449
>02_05_0602 +
30283893-30284170,30286259-30286305,30286534-30287510,
30287611-30287920,30288561-30290197
Length = 1082
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 534 ILKPGDKVGASEATLLNMLNISPFSYGLVGKQVYDSGTIFAPEIL 668
IL+ +++G+ A + + +P+ GLVG V + T++ P++L
Sbjct: 803 ILRGIEEMGSGAARMTTSRHAAPYMEGLVGTLVRLTATLYNPDVL 847
>11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513
Length = 404
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 322 CSPAETSLRSVTNCWRTKSRLQLVPVPLP 408
C+ +RSV + WR + +Q P PLP
Sbjct: 82 CAAGRARVRSVCSSWRNAAAIQRPPRPLP 110
>11_06_0266 - 21791757-21792982,21793154-21793178
Length = 416
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 343 LRSVTNCWRTKSRLQLVPVPLP 408
LRSV WR +RL P PLP
Sbjct: 41 LRSVCQAWRAAARLHRPPPPLP 62
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 262 WTTIQPSRNCCHTSRATLA*CSPAETSLRSVTNCWRTKSRLQLVP 396
W ++ HTS TL+ SP+ +S+ T+C+ + + P
Sbjct: 480 WNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMMSSKP 524
>09_04_0719 +
19716536-19716857,19716949-19717101,19717493-19717707,
19717785-19717855,19717998-19718157,19718598-19718790,
19718936-19719091,19719229-19719317,19719602-19719695,
19719870-19720039
Length = 540
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 129 PKCFIVGADNVGSQQ-MQQIRXSLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIK 305
P +V ++ G+ Q +Q + L G +++ R ++ L+ NP L+ + K
Sbjct: 248 PAMSLVRSETTGTVQGVQTSKHILYGRKAIVIASGAWTRTLLRSFLEPNPTLDIPVMPRK 307
Query: 306 GNVGLVFTRGDLVEVRDKLLE 368
G++ LV + D +++ L+E
Sbjct: 308 GHL-LVLDKFDKLKLNHGLME 327
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 394 PVPLPHCQSSFPPTTPASVHRKPISSKLFPSLPKF 498
P P P C S PP TP + R P + PS P +
Sbjct: 66 PPPSPRCPSCHPPYTPPT-PRPPPTPPYVPSPPPY 99
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 424 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 281
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>11_06_0271 - 21804629-21805836,21805997-21806015
Length = 408
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 322 CSPAETSLRSVTNCWRTKSRLQLVPVPLP 408
C+ +RSV WR + +Q P PLP
Sbjct: 32 CAADRARVRSVCRSWRAAAAIQRPPPPLP 60
>02_01_0152 -
1070249-1070296,1070443-1070515,1070601-1070671,
1070768-1070874,1071836-1072007
Length = 156
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 225 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLE 368
K T RK HL N AL K+ V +G L+E+ D+L++
Sbjct: 86 KVTGKRKRNAQHLQENSALCKVCTSSNSFVVRCCVKGSLLEINDRLIK 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,042,777
Number of Sequences: 37544
Number of extensions: 538638
Number of successful extensions: 1528
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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