Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30010
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 323 7e-89
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z79758-5|CAB54321.1| 687|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical pr... 33 0.28
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 33 0.28
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 29 3.4
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC006712-11|AAK39327.2| 308|Caenorhabditis elegans Hypothetical... 29 4.5
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 6.0
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 323 bits (794), Expect = 7e-89
Identities = 145/226 (64%), Positives = 187/226 (82%)
Frame = +3
Query: 57 MGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSSIVLMGKNTM 236
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 237 MRKAIKDHLDNNPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 416
+RKA++ HL NP+LEKLLPHI NVG VFT+ DL E+R KLLEN+ APA+ GAIAP
Sbjct: 61 IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 417 VVIPAHNTGLGP*KTYFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 596
V +P NTG+GP KT FFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML +
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGV 180
Query: 597 SPFSYGLVGKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 734
+PFSYGLV +QVYD GT++ PE+LD+ E+LR +F +GV NVA++S
Sbjct: 181 TPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVS 226
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 67.3 bits (157), Expect = 1e-11
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Frame = +3
Query: 30 RSPYATLSRMGREDKATWKSNYFIKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLRGSS 209
R +L+++ ++ K T K+N ++ +D+Y FI N+ S + IR + +S
Sbjct: 6 RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64
Query: 210 IVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQA 383
GKN ++ A+ + A L K +KG GL+FT EV + E +
Sbjct: 65 RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEED 124
Query: 384 PARPGAIAPLSVVIPAHNTGLGP*KTYFF------QALSIPTKISKGTIEIINDVHILKP 545
AR G +A +VV+P GP + F + L +PTK+ KG I + + K
Sbjct: 125 YARVGDVATETVVLPE-----GPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKE 179
Query: 546 GDKVGASEATLLNMLNISPFSYGLVGK 626
G+ + +A +L + + L+ K
Sbjct: 180 GEPLTVEQAKILKHFEVKMSQFRLIFK 206
>Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical
protein W10D5.3e protein.
Length = 673
Score = 32.7 bits (71), Expect = 0.28
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Frame = +3
Query: 99 IKIIQLLDEYPKCFIVGADNVGSQQMQQ-----IRXSLRGSSIVLMGKNTMMRKAIKDHL 263
I+II L D+ P + + N+ +QM Q + S G + MG N K I+D L
Sbjct: 536 IEIITL-DDTPPRPVAASANLPMRQMSQQNQMPVGSSPSGMASTQMGMNEGASKTIRDAL 594
Query: 264 DN--NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAP 410
+ P + + PH + GL+ +V ++ L+ + Q P ++P
Sbjct: 595 NKIGEPMINQA-PHFQMQNGLIGRNNQMVHMQQHHLQQQQQQQQSPQIMSP 644
>Z79758-5|CAB54321.1| 687|Caenorhabditis elegans Hypothetical
protein W10D5.3d protein.
Length = 687
Score = 32.7 bits (71), Expect = 0.28
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Frame = +3
Query: 99 IKIIQLLDEYPKCFIVGADNVGSQQMQQ-----IRXSLRGSSIVLMGKNTMMRKAIKDHL 263
I+II L D+ P + + N+ +QM Q + S G + MG N K I+D L
Sbjct: 550 IEIITL-DDTPPRPVAASANLPMRQMSQQNQMPVGSSPSGMASTQMGMNEGASKTIRDAL 608
Query: 264 DN--NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAP 410
+ P + + PH + GL+ +V ++ L+ + Q P ++P
Sbjct: 609 NKIGEPMINQA-PHFQMQNGLIGRNNQMVHMQQHHLQQQQQQQQSPQIMSP 658
>Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical
protein W10D5.3a protein.
Length = 689
Score = 32.7 bits (71), Expect = 0.28
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Frame = +3
Query: 99 IKIIQLLDEYPKCFIVGADNVGSQQMQQ-----IRXSLRGSSIVLMGKNTMMRKAIKDHL 263
I+II L D+ P + + N+ +QM Q + S G + MG N K I+D L
Sbjct: 552 IEIITL-DDTPPRPVAASANLPMRQMSQQNQMPVGSSPSGMASTQMGMNEGASKTIRDAL 610
Query: 264 DN--NPALEKLLPHIKGNVGLVFTRGDLVEVRDKLLENKVQAPARPGAIAP 410
+ P + + PH + GL+ +V ++ L+ + Q P ++P
Sbjct: 611 NKIGEPMINQA-PHFQMQNGLIGRNNQMVHMQQHHLQQQQQQQQSPQIMSP 660
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +1
Query: 178 SRSVXRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLA*CSPAETSLRSVT 357
S + RY+ P + T TT TT P+ T+RAT +P T+ R T
Sbjct: 256 STTTQRYIEPTT-QRPTTRRATTKRITTTTTAAPTTPRLTTARAT----TPLATTSRPTT 310
Query: 358 NCWRT-KSRLQLVPVPLPHCQSSFPPTTPASVHRKPISSKLFPSLPK 495
T ++ L PL ++ PP+ P ++P++ P+ P+
Sbjct: 311 PSPTTPRATTPLATTPLATTRAPLPPSPPPRTSKRPVTQA--PTTPR 355
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 214 CSWEKTL*CAKP-SKTTWTTIQPSRNCCHTSRATLA*CSPAET-SLRSVTNCWRTKSRLQ 387
CSW P S+T + QP+ N R C+P ++S W T S+
Sbjct: 273 CSWMIDPLATDPQSRTHYLQCQPAPNNLFCGRWQRMPCAPGTVFDVQSQVCVWDTNSQPG 332
Query: 388 LVPVPLPHCQSSFP 429
+P P P+ + P
Sbjct: 333 TLPTPAPYVSTQAP 346
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 397 VPLPHCQSSFPPTTPASVHRKPISSKLFPSLP-KFQRVLLKSSTMYTS 537
VP P S PP + + P+SS+ P +P K Q V +SST S
Sbjct: 207 VPTPMSPSGMPPPPRYTAYAPPMSSQTAPPIPTKQQPVDSESSTTSAS 254
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 12 LVLKFHRSPYATLSRMGREDKATWKSNYFIKIIQLLDE 125
L+ K S ++ +SR+ +EDK + SN++IK QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192
>AC006712-11|AAK39327.2| 308|Caenorhabditis elegans Hypothetical
protein Y119C1B.10 protein.
Length = 308
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 576 LLNMLNISPFSYGLVGKQVY---DSGTIFAPEILDIKPEDLRAKFQAG 710
++++ N S F Y LVGK VY + G++ P I D E +R + G
Sbjct: 103 IIHVANNSYFHYFLVGKGVYQEPEEGSVKKPRITDNVAERIRDLLKQG 150
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 421 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 311
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,744,659
Number of Sequences: 27780
Number of extensions: 428208
Number of successful extensions: 1309
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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