Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30009X
(419 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007212-1|AAP35876.1| 436|Homo sapiens ring finger protein 29 ... 30 3.6
BC007750-1|AAH07750.2| 452|Homo sapiens tripartite motif-contai... 30 3.6
AJ291712-2|CAC32840.1| 532|Homo sapiens ring finger protein 29 ... 30 3.6
AJ291712-1|CAC32839.1| 436|Homo sapiens ring finger protein 29 ... 30 3.6
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 29 4.8
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 29 4.8
Z46788-1|CAA86752.1| 348|Homo sapiens human cylicin II protein. 29 6.3
BC114547-1|AAI14548.1| 348|Homo sapiens cylicin 2 protein. 29 6.3
BC039312-1|AAH39312.1| 872|Homo sapiens armadillo repeat contai... 29 8.4
AL139815-2|CAH72189.1| 875|Homo sapiens novel protein protein. 29 8.4
AK098711-1|BAC05389.1| 368|Homo sapiens protein ( Homo sapiens ... 29 8.4
>BT007212-1|AAP35876.1| 436|Homo sapiens ring finger protein 29
protein.
Length = 436
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 366 KVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVE 256
K++++ +F E+ED+E++ G K G+ +V E VE
Sbjct: 303 KIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVE 339
>BC007750-1|AAH07750.2| 452|Homo sapiens tripartite
motif-containing 55 protein.
Length = 452
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 366 KVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVE 256
K++++ +F E+ED+E++ G K G+ +V E VE
Sbjct: 319 KIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVE 355
>AJ291712-2|CAC32840.1| 532|Homo sapiens ring finger protein 29
protein.
Length = 532
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 366 KVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVE 256
K++++ +F E+ED+E++ G K G+ +V E VE
Sbjct: 303 KIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVE 339
>AJ291712-1|CAC32839.1| 436|Homo sapiens ring finger protein 29
protein.
Length = 436
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 366 KVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVE 256
K++++ +F E+ED+E++ G K G+ +V E VE
Sbjct: 303 KIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVE 339
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = -3
Query: 330 EDKEKKPGWSKGKPGDQKVKEEEVEA 253
+++E++PG +G PGD +++ E+EA
Sbjct: 96 QEEEEEPGLVEGDPGDGAIEDPELEA 121
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = -3
Query: 330 EDKEKKPGWSKGKPGDQKVKEEEVEA 253
+++E++PG +G PGD +++ E+EA
Sbjct: 96 QEEEEEPGLVEGDPGDGAIEDPELEA 121
>Z46788-1|CAA86752.1| 348|Homo sapiens human cylicin II protein.
Length = 348
Score = 29.1 bits (62), Expect = 6.3
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -3
Query: 411 QLQNKAAEFSFRNQLKVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVEA 253
++ +KAAE + + K +K E E K+ K KGK +K KEE+++A
Sbjct: 106 EVDSKAAEIGKKGEDKTTQKDTTDSESELKQGKKDSKKGK-DIEKGKEEKLDA 157
>BC114547-1|AAI14548.1| 348|Homo sapiens cylicin 2 protein.
Length = 348
Score = 29.1 bits (62), Expect = 6.3
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -3
Query: 411 QLQNKAAEFSFRNQLKVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVEA 253
++ +KAAE + + K +K E E K+ K KGK +K KEE+++A
Sbjct: 106 EVDSKAAEIGKKGEDKTTQKDTTDSESELKQGKKDSKKGK-DIEKGKEEKLDA 157
>BC039312-1|AAH39312.1| 872|Homo sapiens armadillo repeat
containing 3 protein.
Length = 872
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 342 TLEEEDKEKKPGW--SKGKPGDQKVKEEE 262
T+ + K+ GW SKGK ++KVKEEE
Sbjct: 669 TVLSKSATKEKGWRKSKGKKEEEKVKEEE 697
>AL139815-2|CAH72189.1| 875|Homo sapiens novel protein protein.
Length = 875
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 342 TLEEEDKEKKPGW--SKGKPGDQKVKEEE 262
T+ + K+ GW SKGK ++KVKEEE
Sbjct: 672 TVLSKSATKEKGWRKSKGKKEEEKVKEEE 700
>AK098711-1|BAC05389.1| 368|Homo sapiens protein ( Homo sapiens
cDNA FLJ25845 fis, clone TST08751. ).
Length = 368
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 342 TLEEEDKEKKPGW--SKGKPGDQKVKEEE 262
T+ + K+ GW SKGK ++KVKEEE
Sbjct: 165 TVLSKSATKEKGWRKSKGKKEEEKVKEEE 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,163,052
Number of Sequences: 237096
Number of extensions: 1092004
Number of successful extensions: 2753
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2708
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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