Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30009X
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    26   0.20 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         25   0.35 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   0.61 
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   5.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   7.5  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 157 ILFIWLLALCLCVSE 113
           I+ IWLLALCL V +
Sbjct: 175 IIVIWLLALCLAVPQ 189


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 282 QKVKEEEVEA*TS*YPNH*DLSPTVNNYVMCPIVCLSAKRLKFYLSGC-LRCV 127
           ++++EE +E  T    ++  L P  +  V C ++   +K L    S C +RC+
Sbjct: 34  RQIEEENIEPDTELMDSNEPLLPLRHRRVTCDVLSWQSKWLSINHSACAIRCL 86


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 378 RNQLKVVKKKEFTLEEEDKEKKPGWSKGKP-GDQKVKEEE 262
           RNQ K V  + F ++ +    +PG S G+P G ++ +E E
Sbjct: 446 RNQRKNVLDRLFRMDRDAVYLQPGMSFGEPLGLRRPQERE 485


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 142 LLALCLCVSEPDI*VKFKQIL 80
           LLA C  +S+P+  +K  +IL
Sbjct: 100 LLAECSPISDPNALIKISKIL 120


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = -3

Query: 360 VKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEV 259
           VK+KE   ++E  +       G PG   ++ +++
Sbjct: 265 VKRKEEKAQKEKDKPNSTTMNGSPGSGGIRSDQM 298


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,411
Number of Sequences: 438
Number of extensions: 1997
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)