Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30007
         (456 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...    65   6e-10
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...    61   1e-08

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score = 65.3 bits (152), Expect = 6e-10
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = -1

Query: 456 KVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 349
           K+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+P
Sbjct: 298 KIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETP 333


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -1

Query: 456 KVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 349
           K+W+++  QF  RQK++LPKWFGERPGKKKG+ E+P
Sbjct: 268 KLWKDKIGQFDSRQKSKLPKWFGERPGKKKGDPETP 303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,300,980
Number of Sequences: 1657284
Number of extensions: 3160875
Number of successful extensions: 8851
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8850
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)