BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30006 (891 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 86 7e-17 AF200424-1|AAF24342.1| 877|Drosophila melanogaster Short stop/K... 37 0.033 >AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH, isoform H protein. Length = 8805 Score = 85.8 bits (203), Expect = 7e-17 Identities = 43/87 (49%), Positives = 59/87 (67%) Frame = +3 Query: 9 ITLQQAIAKRIIDRKTGDYIDNSGNKFTLADAAKVGLIAVVGAPLVAASKVIQVVRSTMV 188 I++ +AIA+ I D KT +D+ G L A K+GL++VVGAPLVAA ++ VR V Sbjct: 2346 ISVTEAIARSIYDPKTATILDSEGQPVDLITATKLGLLSVVGAPLVAAEGALRTVR--FV 2403 Query: 189 VDPQTGEKLPMEVAYERGLVDPDTYKR 269 DP+TGE++P+EVAYERG+V D R Sbjct: 2404 TDPRTGEQIPVEVAYERGIVSRDQLHR 2430 Score = 39.5 bits (88), Expect = 0.006 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = +3 Query: 186 VVDPQTGEKLPMEVAYERGLVDPDTYKRYEEEIRDRTLESDKPRSEHXXXXXXXXXXXXX 365 +VDP T + + + A R + DP T + E + L + Sbjct: 2337 IVDPTTKQPISVTEAIARSIYDPKTATILDSEGQPVDLIT-------ATKLGLLSVVGAP 2389 Query: 366 XXSPEGAA-TVTVVVDPNTGERLPLDVAYGRGLI 464 + EGA TV V DP TGE++P++VAY RG++ Sbjct: 2390 LVAAEGALRTVRFVTDPRTGEQIPVEVAYERGIV 2423 Score = 37.1 bits (82), Expect = 0.033 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Frame = +3 Query: 9 ITLQQAIAKRIIDRKTGDYIDN-SGNKFTLADAAKVGLIAVVGAPLVAASKVIQVVRSTM 185 ITLQ+A+ +++ KTG Y++ + K T A+A LI V L + + + Sbjct: 1717 ITLQEALQSGVLNAKTGRYVNEVTKEKLTFAEARNRQLI-VKPYTLKDICDLNLLDKQAQ 1775 Query: 186 VVDPQTGEKLPMEVAYERGLVDPDTYK 266 + P EKL + A E G++D + K Sbjct: 1776 ITSPMRREKLSIMQAIEAGVLDGNLLK 1802 Score = 36.3 bits (80), Expect = 0.057 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = +3 Query: 3 KFITLQQAIAKRIIDRKTGDYIDNSGNKFTLADAAKVGLIAVVGAPLVAASKVI--QVVR 176 K++ L AI ++++D G Y N GN+ AA+ + V L++ V+ Q+ R Sbjct: 4466 KYLRLANAIKEQLVDDSRGCY--NLGNEQLDLQAARARGLIVSNRRLLSLELVLRQQLYR 4523 Query: 177 --STMVVDPQTGEKLPMEVAYERGLVDPDT 260 + DP TGE L + A G +DP T Sbjct: 4524 PETGKFCDPTTGEYLDLIEAIHSGFIDPAT 4553 Score = 33.1 bits (72), Expect = 0.53 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = +3 Query: 99 DAAKVGLIAVVGAPLVAASKVIQVVRSTMVVDPQ 200 DAAK+G +A+VGAP++A ++ + + + P+ Sbjct: 3455 DAAKLGALAIVGAPVLAGKALVDALTTEKTLKPE 3488 Score = 31.1 bits (67), Expect = 2.1 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 177 STMVVDPQTGEKLPMEVAYERGLVD 251 S V+DP TG+K+ ++ A+ER ++D Sbjct: 2189 SLSVIDPNTGDKISVQSAFERDILD 2213 Score = 31.1 bits (67), Expect = 2.1 Identities = 21/80 (26%), Positives = 37/80 (46%) Frame = +3 Query: 18 QQAIAKRIIDRKTGDYIDNSGNKFTLADAAKVGLIAVVGAPLVAASKVIQVVRSTMVVDP 197 + A+ K IID +T + ++N+ N FT V + + L+ R V+DP Sbjct: 2459 KDALRKGIIDEETCEILENTSN-FTNPKGEVVNITEALNTGLIDG-------RRGQVIDP 2510 Query: 198 QTGEKLPMEVAYERGLVDPD 257 Q L + A E+ ++D + Sbjct: 2511 QNNRVLNLRQAVEQKIIDSE 2530 Score = 30.3 bits (65), Expect = 3.7 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = +3 Query: 186 VVDPQTGEKLPMEVAYERGLVDPD 257 ++DP+TGE +P++ A ER + P+ Sbjct: 1952 LLDPKTGETVPLDTAIERKFITPE 1975 Score = 30.3 bits (65), Expect = 3.7 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = +3 Query: 39 IIDRKTGDYIDNSGNKFTLADAAKVGLIAVVGAPLVAASKVIQVVRSTM---VVDPQTGE 209 I+D K G D + +A G++ PL V++ V + VDP++GE Sbjct: 4181 IVDSKHGTVRDADDHPIDFKEAFDRGILVEAKKPLRLIEAVVKNVYDEVDGHFVDPKSGE 4240 Query: 210 KLPMEVAYERGLVD 251 KL A L+D Sbjct: 4241 KLNFAEALNTNLLD 4254 Score = 29.9 bits (64), Expect = 4.9 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +3 Query: 402 VVDPNTGERLPLDVAYGRGLIDPVSYKKYVLS 497 V+DPNTG+++ + A+ R ++D SY Y S Sbjct: 2192 VIDPNTGDKISVQSAFERDILD--SYGNYTNS 2221 Score = 29.5 bits (63), Expect = 6.5 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +3 Query: 99 DAAKVGLIAVVGAPLVAASKVIQVVRS 179 DAAK+G + V+ AP++A ++ V+S Sbjct: 2892 DAAKLGALGVIAAPVLAGGAIVSGVKS 2918 Score = 29.5 bits (63), Expect = 6.5 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +3 Query: 396 TVVVDPNTGERLPLDVAYGRGLID 467 TVV DP+TG +PL A GLID Sbjct: 4882 TVVRDPSTGVIVPLTAAISSGLID 4905 Score = 29.1 bits (62), Expect = 8.6 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 402 VVDPNTGERLPLDVAYGRGLIDP 470 ++DP TGE +PLD A R I P Sbjct: 1952 LLDPKTGETVPLDTAIERKFITP 1974 >AF200424-1|AAF24342.1| 877|Drosophila melanogaster Short stop/Kakapo truncated isoformprotein. Length = 877 Score = 37.1 bits (82), Expect = 0.033 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Frame = +3 Query: 9 ITLQQAIAKRIIDRKTGDYIDN-SGNKFTLADAAKVGLIAVVGAPLVAASKVIQVVRSTM 185 ITLQ+A+ +++ KTG Y++ + K T A+A LI V L + + + Sbjct: 555 ITLQEALQSGVLNAKTGRYVNEVTKEKLTFAEARNRQLI-VKPYTLKDICDLNLLDKQAQ 613 Query: 186 VVDPQTGEKLPMEVAYERGLVDPDTYK 266 + P EKL + A E G++D + K Sbjct: 614 ITSPMRREKLSIMQAIEAGVLDGNLLK 640 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 34,875,598 Number of Sequences: 53049 Number of extensions: 686547 Number of successful extensions: 2182 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2181 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 4352837424 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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