Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30006
(891 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.8
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 6.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 8.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 8.6
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 182 STPYNLNNFRSRN*RCTYNSYQTYFCSI 99
S YN +N+ + N YN+Y+ + +I
Sbjct: 86 SNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 240 PFHMLPPSVIFLPFV 196
P H LPP++I +P V
Sbjct: 66 PGHKLPPNIIAIPDV 80
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 185 HSTPYNLNNFRSRN*RCTYNSY 120
+ T +N NN+ + N YN+Y
Sbjct: 320 NKTIHNNNNYNNNNYNNNYNNY 341
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 144 VAASKVIQVVRSTMVVDPQTGEKLPMEVAYERG 242
V S + + V + +V P TG+ P V+Y G
Sbjct: 87 VCKSLIERQVYAVVVSHPLTGDLSPAAVSYTSG 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,893
Number of Sequences: 438
Number of extensions: 5261
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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