Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30003
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.19 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = -3

Query: 642  SRTRSVWTSSPTN*KRSVFSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQ 472
            S T S W ++ T  + +   P T +        NWP+  T    P  V   V   SQ
Sbjct: 1045 STTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQ 1101


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = -3

Query: 207 SWLVSKLSHSTYRPHTYSNRTCTHTYAA 124
           SW   +    +++P   +   CTH + A
Sbjct: 32  SWAGYRNGEGSFKPQNINANLCTHVHYA 59


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/24 (29%), Positives = 9/24 (37%)
 Frame = -3

Query: 207 SWLVSKLSHSTYRPHTYSNRTCTH 136
           SW + +     Y P       CTH
Sbjct: 32  SWAIYRPDKGEYHPKNIDPNICTH 55


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 444 PTTFNSSSSSEILASPD 494
           P  F ++SSS  L SPD
Sbjct: 216 PAEFPTTSSSSALESPD 232


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 408 FSSDTSRDLRELPTTFNS 461
           F  D  RDL E+  +FNS
Sbjct: 86  FQGDIHRDLTEVYFSFNS 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,046
Number of Sequences: 336
Number of extensions: 1976
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)