Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30003
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 42 6e-05
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 38 0.001
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 35 0.012
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 32 0.066
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.12
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 31 0.20
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.20
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 30 0.27
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.27
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 30 0.35
SPAC9.13c |cwf16|SPAPJ735.01c|splicing factor |Schizosaccharomyc... 29 0.46
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 29 0.61
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 29 0.61
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 29 0.81
SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual 29 0.81
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.81
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.4
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 27 1.9
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 2.5
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 2.5
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 3.3
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 27 3.3
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 26 4.3
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 26 5.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 5.7
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 7.6
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 25 10.0
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 10.0
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 10.0
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 25 10.0
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 25 10.0
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/94 (22%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = -2
Query: 658 LENRAQQDEERMDQLTNQLKEVSLLAEDAD---GKSDEVSRKLAFVEDELEVAEDRVKSG 488
L +++ E ++++L + K++ L A++ D +++++SRK+ +E+ELE + ++
Sbjct: 46 LSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRET 105
Query: 487 DAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 386
K+ + + + + ++SLE + Q++EE
Sbjct: 106 TEKMRQTDVKAEHFERRVQSLERERDDMEQKLEE 139
Score = 33.9 bits (74), Expect = 0.022
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Frame = -2
Query: 664 KVLENRAQQDEE--RMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKS 491
K+ RA+ DE R + +LKEV L + + + +SRK E +LE E+ K
Sbjct: 7 KINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQ 66
Query: 490 GDAKISELEEELKVVGNSL-KSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEK 314
K ++ E+ K L + +E+ EE+ +E + E+
Sbjct: 67 LRLK-ADNEDIQKTEAEQLSRKVELLEEE----LETNDKLLRETTEKMRQTDVKAEHFER 121
Query: 313 TVKKLHKEVDRLEDELGINKDRYKSLADEMD 221
V+ L +E D +E +L D+Y + E+D
Sbjct: 122 RVQSLERERDDMEQKLEEMTDKYTKVKAELD 152
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/94 (25%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Frame = -2
Query: 655 ENRAQQDEERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVED---ELEVAEDRVKSGD 485
+ + ++ +ER++ LT + + A+D++GK VS++ A +E+ +L + E+ + +
Sbjct: 164 DKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRE 223
Query: 484 AKISELEEELKV----VGNSLKSLEVSEEKANQR 395
K++ E++LK + N L +E E+ N+R
Sbjct: 224 LKMNGKEDDLKKREKDLENRLLKVEEHEKSLNER 257
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 34.7 bits (76), Expect = 0.012
Identities = 21/79 (26%), Positives = 43/79 (54%)
Frame = -2
Query: 634 EERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEEL 455
+E +++LT+++ ++S D + DE+ ++L +E+E A++ +K S L E+L
Sbjct: 598 KEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKE---DSTSKTSNLLEQL 654
Query: 454 KVVGNSLKSLEVSEEKANQ 398
K+ + SL E+ Q
Sbjct: 655 KMTEAEVDSLRKENEENKQ 673
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 32.3 bits (70), Expect = 0.066
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = -2
Query: 652 NRAQQDEERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKIS 473
+R+Q+D++ + +L + + + + KS EVS L+ E+ ED + S D +++
Sbjct: 551 HRSQRDKQESTERELRLLQEKAASLERN-KSSEVSNLLSRYNTEVAHLEDALHSKDRELA 609
Query: 472 ELEEELKVVGNSLKSLEVSEEK 407
L ELK N + L +E+
Sbjct: 610 NLGVELKSTENRYRQLLQEKEE 631
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.5 bits (68), Expect = 0.12
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = -2
Query: 634 EERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEEL 455
EER D L N+L ++ D+D + L V DEL+ + S + SE+ ++
Sbjct: 1172 EERSD-LANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQDR 1230
Query: 454 KVVGNSLKSLEVSEEK 407
+ +SLK E S K
Sbjct: 1231 DDLLDSLKGCEESFNK 1246
Score = 29.1 bits (62), Expect = 0.61
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 7/162 (4%)
Frame = -2
Query: 634 EERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVA---EDRVKSGDAKISE-- 470
++ M + NQ +VS L E +GK +S L + L VA D++ + A++S+
Sbjct: 839 QKLMHKHVNQESKVSELKE-VNGK---LSLDLKNLRSSLNVAISDNDQILTQLAELSKNY 894
Query: 469 --LEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLH 296
LE+E + + LKSLE ++ + EE K K +
Sbjct: 895 DSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQ 954
Query: 295 KEVDRLEDELGINKDRYKSLADEMDSTFAEXXXXXXXXLHIQ 170
+E+ L++E S+ ++D T ++ H++
Sbjct: 955 EEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLK 996
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 30.7 bits (66), Expect = 0.20
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -2
Query: 598 EVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEV 419
E+SLL + K VSR + + E+ E +K +SELE EL+ S L++
Sbjct: 717 EISLLKD----KYTVVSRSVEDKKKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQI 772
Query: 418 SEEKANQRV 392
EK +++
Sbjct: 773 QVEKVEEKI 781
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.20
Identities = 31/153 (20%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Frame = -2
Query: 658 LENRAQQDEERMDQLTNQLKEVSLLAEDADGKSD--EVSRKLAFVEDELEVAEDRVKSGD 485
L++ ++ E+ + N+L+ + A DADGK++ + +++ + + E +V++
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLS 1548
Query: 484 AKISELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVK 305
A+++ L E G SLE ++E A R + + + V
Sbjct: 1549 AELAALREHSPTQG----SLENADEIARLRSQ---LESTKQYYEKEKETEILAARSELVA 1601
Query: 304 KLHKEVDRLEDELGINKDRYKSLADEMDSTFAE 206
+ K + LE++L R K L ++ +E
Sbjct: 1602 EKEKTKEELENQLNEKSQRIKELEEQAQKNSSE 1634
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = -2
Query: 628 RMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDA----KISELEE 461
R++QLTN+L+ + ++ + + K +E L + +++ + S + K+++LE+
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQLQLTSLTSERSLALEKLNDLEK 730
Query: 460 ELKVVGNSLKSLEVSEEKANQRV 392
L + S L+ S + +++
Sbjct: 731 SLVLSERSKDELDESYKSLQEQL 753
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.27
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -2
Query: 673 RMCKVLENRAQQDEERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVK 494
+M + +E R + E LT L+E + E D K +++ + ++DE + +
Sbjct: 458 QMTREMEERVSEVERTF--LTKLLEESAQGIEYTDQKLEKMGGWMKKLQDENSEKTETIA 515
Query: 493 SGDAKISELEEELK-VVGNSLKSLEVSEEKANQ 398
+ I EL EEL+ + S+K +++ NQ
Sbjct: 516 QLEQIIEELHEELRSLEEESIKESSATQQNENQ 548
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.3 bits (65), Expect = 0.27
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -2
Query: 613 TNQLKEVSLLAEDADG---KSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVG 443
+N L E+ L E+ +G K D ++++ + +ELE R+KS + +SEL +
Sbjct: 516 SNDLNEIHDLREENEGLTLKIDSITKEKDRLINELE---QRIKSYEVNVSELNGTIDEYR 572
Query: 442 NSLKSLE 422
N LK E
Sbjct: 573 NKLKDKE 579
Score = 25.4 bits (53), Expect = 7.6
Identities = 20/95 (21%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Frame = -2
Query: 658 LENRAQQDEERMDQLTNQLKEVSLLAEDADGKS-DEVSRKLAFVEDELEVAEDRVKSGDA 482
L+ + + E ++ L +Q+ ++ +GK+ +++ + +E+E +V E ++++ +
Sbjct: 395 LQEQLHKANEEIEFLHDQISRMN-----EEGKNFEDIMLQFRSLEEERDVLESKLQTLED 449
Query: 481 KISELEEELKVVGNSLKSL-----EVSEEKANQRV 392
+ L +GN ++SL E+ EEK + R+
Sbjct: 450 DNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRL 484
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 29.9 bits (64), Expect = 0.35
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = -2
Query: 553 VSRKLAFVEDEL-------EVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQR 395
+ R+L VEDEL V + R + + +IS+L + L+ N+++ L++ EK+ ++
Sbjct: 519 LQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKK 578
Query: 394 VEE 386
E+
Sbjct: 579 NED 581
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = -2
Query: 634 EERMDQLTNQLKEVSLLAEDADGK----SDEVSRKLAF---VEDELEVAED-RVKSGDAK 479
+E D +TNQ + S A + + E R A V +E++V D RV++ AK
Sbjct: 644 KEDADFITNQYQNASTFAAEQSKEVAKLQAECKRLQAINSKVMEEVKVYNDSRVEALLAK 703
Query: 478 ISELEEELKVV 446
+S LEE LK++
Sbjct: 704 VSSLEETLKIL 714
>SPAC9.13c |cwf16|SPAPJ735.01c|splicing factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 29.5 bits (63), Expect = 0.46
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = -2
Query: 595 VSLLAEDADGK-SDEVSRKLAFVEDELE-VAEDRVKSGDAK-ISELEEELKVVGNSLKSL 425
++LL EDA G +E S+K F E+E++ A+ S D + I L E V K +
Sbjct: 179 IALLKEDAYGSIEEEESKKRKFEEEEIDREAKSLFSSQDGEIIRRLNAETTVEKELPKPI 238
Query: 424 E-VSEEKANQRVEEF 383
+ VSE+ A + F
Sbjct: 239 DLVSEKLATSNIPNF 253
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 29.1 bits (62), Expect = 0.61
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 207 SWLVSKLSHSTYRPHTYSNRTCTHTYAAPLPHTHKHMYINYTTTRIHVY 61
SW+ K S+ ++ + RTCT + AP+ + YI R+HVY
Sbjct: 674 SWIGQKYSNVSFEKIDVAERTCTISLNAPILPDDGYAYI-----RLHVY 717
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 29.1 bits (62), Expect = 0.61
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = -2
Query: 508 EDRVKSGDAKISELEEELKVVGNSLKSLEV---SEEKANQR 395
E+R+K+ DA I EE+ K + ++++SLE+ EKAN++
Sbjct: 47 EERIKACDAGIQTSEEQKKELEHTMQSLEMIINVLEKANEK 87
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 0.81
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -2
Query: 658 LENRAQQDEERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVK 494
L + + +ER+D LTN L E++LL E K DE ++ ++L+ E R K
Sbjct: 216 LVDERNEMQERLDILTNLLDELTLLYE--TDKFDETMKEAILSFEDLKEQEIRRK 268
>SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual
Length = 231
Score = 28.7 bits (61), Expect = 0.81
Identities = 12/24 (50%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -2
Query: 307 KKLHKEVDRLEDEL-GINKDRYKS 239
KK+HKE++ L+ EL G+N D++ S
Sbjct: 63 KKIHKELESLKRELAGLNADKFSS 86
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.7 bits (61), Expect = 0.81
Identities = 16/77 (20%), Positives = 34/77 (44%)
Frame = -2
Query: 652 NRAQQDEERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKIS 473
+R + ER+ L NQ+ E + + LA + E+ D + + K+S
Sbjct: 895 SRVEVVHERLSSLENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLS 954
Query: 472 ELEEELKVVGNSLKSLE 422
++++ + + + K LE
Sbjct: 955 SIKKDEQTISSKYKELE 971
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = -2
Query: 571 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 392
+ + + V R L E++L++ + + ++ + E+ N L+SLE + + R+
Sbjct: 844 ESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVATRI 903
Query: 391 EE 386
E+
Sbjct: 904 EQ 905
Score = 25.0 bits (52), Expect = 10.0
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = -2
Query: 610 NQLKEVS-LLAEDADGKSDEVSRKLAF---VEDELEVAEDRVKSGDAKISELEEELKVVG 443
N KE S L + D +E+ KL+ +E LE DR+ A I+ + E + +
Sbjct: 407 NSTKENSDYLKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLT 466
Query: 442 NSLKSLEVSEEKANQRVE 389
+ KSL E K +E
Sbjct: 467 DKRKSLWREEAKLKSSIE 484
Score = 25.0 bits (52), Expect = 10.0
Identities = 18/84 (21%), Positives = 34/84 (40%)
Frame = -2
Query: 472 ELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLHK 293
E+E ELK + K +E+S E R+ + + + KL
Sbjct: 422 EMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKS 481
Query: 292 EVDRLEDELGINKDRYKSLADEMD 221
++ ++D+L ++ K+L MD
Sbjct: 482 SIENVKDDLSRSE---KALGTTMD 502
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -3
Query: 642 SRTRSVWTSSPTN*KRSVFSPRTLTENPTRFRENWPSLKTNSKSP 508
S +++ ++SP++ K+++F P ++ F NW S + SP
Sbjct: 63 SNSQTDLSNSPSSKKKNIFYPIARAKHSFYFNHNWSSDLQQANSP 107
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 529 EDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 392
E E E A K D+K S++EEE + ++ E+ EEK N+ +
Sbjct: 15 ETESESANGDTKQDDSKKSQVEEE----EDGIEESELGEEKDNKTI 56
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = -2
Query: 619 QLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 440
+L + +E S ++ + + D K +E+ E + ++K+ + + LEE K +
Sbjct: 166 ELAKKFEEASQISNKLEKEKDATGSKS--IEELWEEHQKQLKNAGLEPASLEEYQKQWED 223
Query: 439 SLKSLEVSEEKANQRVEEF 383
LKS +S++ V F
Sbjct: 224 FLKSNNISDDPYTSSVNSF 242
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = -2
Query: 649 RAQQDEERMDQLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISE 470
R + +R +Q + EV E+ + + DE+ R+ F+E+ EV D V D + E
Sbjct: 135 RKRARHDRRNQFLDIEAEVDEDEEELEDEEDEIGREDGFIEE--EVGADYV-GDDRRHRE 191
Query: 469 LEEELKVVGNSLKSLEVSEE 410
L+ + + + S+ + ++EE
Sbjct: 192 LDRQRQEL-QSVDAERLAEE 210
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 567 ENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSVTPLNLSK 421
EN R ++KT K +T SL+ +S++LKK R V + +K
Sbjct: 7 ENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAK 55
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 26.2 bits (55), Expect = 4.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 512 DFEFVFNEGQFSRNLVGFSVSVLGEKTDLFQ 604
DF++ F +F + +GF + +G K + Q
Sbjct: 1402 DFDYFFQLAEFCMDFLGFCYNTIGTKMEAIQ 1432
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 25.8 bits (54), Expect = 5.7
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -2
Query: 571 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 392
+ K + +S K A E E ++ K K EEE V + E E+K N V
Sbjct: 7 NNKDESISTKNALEEKSNETKDETSKR---KHDPAEEE-SAVSTKVSKSEPLEDKGNAEV 62
Query: 391 EEF 383
+EF
Sbjct: 63 KEF 65
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = -2
Query: 559 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 386
D+ + + F E + E A + + ++ +LEE+++ L++++ S + QR+E+
Sbjct: 585 DQQTTEAPFEEPD-EPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQ 641
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 255 RIDTRAWLMRWIPPSPSWLVSKLSHSTYRPHTYSNRTCTHTYAAPL 118
+++ R R++ S +LVS H + YS+ CTH + P+
Sbjct: 229 QLELRCKKCRFVLASSDYLVS---HEPKDENNYSHTRCTHYFLEPI 271
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 585 SPRTLTENPTRFRENWPSLKTNSKSP 508
+P LTE+ N PS + NSKSP
Sbjct: 630 TPEDLTEDVPFLHFNVPSSRPNSKSP 655
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 225 WIPPSPSWLVSKLSHSTYRPHTYSNRT-CTHTYAAPLPHTHKHMY 94
W PP P WL S L+ + R CT + T+ +Y
Sbjct: 455 WDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRTYPQLY 499
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 10.0
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -2
Query: 619 QLTNQLKEVSLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 440
Q+T L++ L + + + D + + + ++ L AED KS + S+ +E+LK
Sbjct: 307 QMTETLEKYKSLDFNMEKEGDVIQQLKSSIKKPLSGAEDEQKS-RSMFSKNDEKLK---- 361
Query: 439 SLKSLEVSEE 410
KSLE+ E+
Sbjct: 362 --KSLELMED 369
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 204 WLVSKLSHSTYRPHTYSNR--TCTHTY 130
W + LSH T R ++ SNR TC + +
Sbjct: 221 WEIPGLSHKTLREYSLSNRVDTCRNQF 247
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 10.0
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 580 EDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSE-EKA 404
E+ D D R F E E ++ SG ++ +EL+EE NS+K + + E EK
Sbjct: 59 EERDAHLDRFRRDSTF---ESETSDHEDFSGGSE-NELDEETTKNANSIKKISLEEVEKQ 114
Query: 403 NQRVE 389
+ ++
Sbjct: 115 RKAIK 119
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,063,718
Number of Sequences: 5004
Number of extensions: 33555
Number of successful extensions: 219
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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