Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0995
         (499 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596...    33   0.13 
05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,102...    29   2.1  
10_03_0006 + 6929237-6929304,6929581-6929603,6929609-6929710,692...    28   3.6  
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960...    28   3.6  

>05_02_0043 +
           5964749-5966406,5966725-5966791,5967174-5967329,
           5967782-5967865,5968020-5968073
          Length = 672

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = -1

Query: 496 DHYSHSCHMTSYMRPSYNSLLHSGHT 419
           DH  H CHM  Y+RPS N   H GHT
Sbjct: 306 DHLLHLCHM--YVRPSPNQDEHHGHT 329


>05_01_0154 +
           1020650-1022050,1022304-1022373,1022496-1022617,
           1022753-1023031,1023402-1023779,1024079-1024188,
           1024394-1024622,1024725-1025303
          Length = 1055

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 215 VVSVLILSNNIAVRMWQEV*VQKELSSAHRIESLH 319
           +V  LIL  N AV +WQE   +K L +   I+S H
Sbjct: 112 LVIFLILVVNAAVGVWQETNAEKALEALREIQSDH 146


>10_03_0006 +
           6929237-6929304,6929581-6929603,6929609-6929710,
           6929752-6930207,6930237-6930538,6930628-6930717,
           6931379-6931471
          Length = 377

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 357 WCPNETVLKGHIETIHKRASYV 422
           W PNETV  G++  +HK + +V
Sbjct: 117 WGPNETVTIGYVNMVHKISHHV 138


>03_02_0579 -
           9606317-9606892,9607571-9607799,9607902-9608011,
           9608898-9609275,9609380-9609658,9610044-9610168,
           9610269-9610335,9610582-9612006
          Length = 1062

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 215 VVSVLILSNNIAVRMWQEV*VQKELSSAHRIESLHIT 325
           +V  LIL  N  V +WQE   +K L +   I+S H T
Sbjct: 120 LVIFLILIVNAVVGVWQESNAEKALEALKEIQSEHAT 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,351,434
Number of Sequences: 37544
Number of extensions: 243985
Number of successful extensions: 715
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)