Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0995
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 34 0.066
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.12
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 33 0.12
U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 29 2.5
Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 28 3.3
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 28 4.3
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 28 4.3
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 27 5.7
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 27 5.7
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 27 5.7
Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical p... 27 7.6
Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical p... 27 7.6
U53139-4|AAK18931.2| 369|Caenorhabditis elegans Serpentine rece... 27 7.6
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 27 7.6
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 27 7.6
AC024859-9|ABQ13045.1| 296|Caenorhabditis elegans Hypothetical ... 27 7.6
AC024859-8|ABQ13046.1| 337|Caenorhabditis elegans Hypothetical ... 27 7.6
Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 27 10.0
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 27 10.0
M98552-7|AAK82925.2| 355|Caenorhabditis elegans Hypothetical pr... 27 10.0
AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally sym... 27 10.0
AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally sym... 27 10.0
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVAC-TKSKIWCPNETVLKGHIETIHKRASYVCPEC 434
C KKF++ +HI+++ S + C T +K E L+ H + H +AS+ CP+C
Sbjct: 84 CEKKFRYPNKLREHIKIHDSNRYQCLECSTITKFGTYGE--LRAHHKLHHSKASHKCPQC 141
Query: 435 N 437
+
Sbjct: 142 S 142
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 33.9 bits (74), Expect = 0.066
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVA-CTKSKIWCPNETVLKGHIETIHKRASYVCPEC 434
C +F FKK L H ++ P S C KS L HI T K Y C +C
Sbjct: 305 CNLRFHFKKDMLVHERIHTGEKPYSCGYCMKS---FAQSQALTAHIRTHTKELPYGCGKC 361
Query: 435 NK 440
+K
Sbjct: 362 DK 363
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 255 ECGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHKRASYVCPEC 434
+C + F K+ H+ ++ P+S CT+ +LK H S+VCP C
Sbjct: 43 DCHEMFAVKRELATHMRIHSGEQPHS--CTQCGKEFGTRQLLKKHWMWHTGERSHVCPHC 100
Query: 435 NK 440
NK
Sbjct: 101 NK 102
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 255 ECGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHKRASYVCPEC 434
+C + F K+ H+ ++ P+S CT+ +LK H S+VCP C
Sbjct: 92 DCHEMFAVKRELATHMRIHSGEQPHS--CTQCGKEFGTRQLLKKHWMWHTGERSHVCPHC 149
Query: 435 NK 440
NK
Sbjct: 150 NK 151
>U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical
protein T20H4.2 protein.
Length = 235
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSK 353
C K F+ KK++ +H EL+H+ P V C K
Sbjct: 165 CQKSFENKKTFREHCELDHT--PEVVRCVFCK 194
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/63 (25%), Positives = 23/63 (36%)
Frame = +3
Query: 255 ECGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHKRASYVCPEC 434
+C K K+ +HI + PN C+ I LK H++ Y C C
Sbjct: 75 QCNKHIKYPSKITEHIRKHTGEKPN--VCSICNISFSQAHTLKTHMQQHAHEKPYKCSFC 132
Query: 435 NKE 443
E
Sbjct: 133 TAE 135
>Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.7 protein.
Length = 333
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/88 (25%), Positives = 37/88 (42%)
Frame = -3
Query: 491 LQPLVSYDELHETXLQFFVAFWAYIRSSFVYCLYVSLQNSFIWTPYFTFCASNTIR*CGV 312
L PL+ Y L T QF W S ++ + SF+ ++TF S R G+
Sbjct: 27 LYPLIFYLVLCRTPKQFGNLKW--FLSFHIFAITCQWLCSFLLIDFYTFVPSKITRIDGL 84
Query: 311 IQFYVLKIALFELKLLATFLQQYCCLIL 228
+ ++ L+ + + L CL+L
Sbjct: 85 LIDFIDAKVLYTSMYILSALSTSSCLLL 112
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 82 KKLKSSNADQSIDIKQEVNSGRVYVCTMCKKS 177
K+L++S D + Q+V R+YVC +CK+S
Sbjct: 562 KQLENSLVDLN---SQDVEKQRIYVCNVCKQS 590
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHKRASYVCPECN 437
C K F +H+ L+ P S T ++++ ++ L H+ T Y CP CN
Sbjct: 374 CSKSFSRSDMLTRHMRLHTGAKPYSCP-TCNQVFSRSDH-LSTHLRTHTGEKPYACPMCN 431
>Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical
protein F36D3.4 protein.
Length = 285
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 73 SKNKKLKSSNADQSIDIKQEVNSGRVYVCTMCKKSCDEDK 192
S+ KKL+ + D+S K+ S + C K CD +K
Sbjct: 84 SEKKKLRRESKDKSSKSKRSKRSSKSKKCDKSSKKCDLNK 123
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHK-RASYVCPEC 434
CGK F +S +H H T + C + P L+ H++ H ++C C
Sbjct: 17 CGKYFSDDESLREHRRQRHMTCHMCLLCNRR---IPENETLREHMKNKHNIWKLFICVCC 73
Query: 435 N 437
N
Sbjct: 74 N 74
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHK-RASYVCPEC 434
CGK F +S +H H T + C + P L+ H++ H ++C C
Sbjct: 17 CGKYFSDDESLREHRRQRHMTCHMCLLCNRR---IPENETLREHMKNKHNIWKLFICVCC 73
Query: 435 N 437
N
Sbjct: 74 N 74
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 GKKFKFKKSYLQHIELNHSTLP-NSVACTKSKIWCPNETVLKGHIETIHKRASYVCPECN 437
G F+ KKS L+H+ H + C+ P+ H HK+ Y C C+
Sbjct: 158 GTPFRDKKSQLEHLTTQHLQIQVTQHICSICDSAFPSPQAQSVHFAEAHKK--YSCTNCD 215
Query: 438 KE 443
E
Sbjct: 216 FE 217
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHKRASYVCPECN 437
CG+ F ++S L+H+ H N PN T ++ +I + Y C EC
Sbjct: 197 CGESFASRQSMLRHVGRKHPDAKND----------PNVTAVR-YISAESPKHPYACIECG 245
Query: 438 K 440
K
Sbjct: 246 K 246
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIETIHKRASYVCPECN 437
CG+ F ++S L+H+ H N PN T ++ +I + Y C EC
Sbjct: 315 CGESFASRQSMLRHVGRKHPDAKND----------PNVTAVR-YISAESPKHPYACIECG 363
Query: 438 K 440
K
Sbjct: 364 K 364
>Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHI---ETIHKRAS-YVC 425
CGK+FK + QH+ ++++ + CT +C K H+ E IH ++C
Sbjct: 112 CGKRFKARGGLQQHMRIHNN--EKAYVCT----FCAKSFTQKSHLDQHERIHTGVKPFLC 165
Query: 426 PECNK 440
C +
Sbjct: 166 AFCGR 170
>Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHI---ETIHKRAS-YVC 425
CGK+FK + QH+ ++++ + CT +C K H+ E IH ++C
Sbjct: 178 CGKRFKARGGLQQHMRIHNN--EKAYVCT----FCAKSFTQKSHLDQHERIHTGVKPFLC 231
Query: 426 PECNK 440
C +
Sbjct: 232 AFCGR 236
>Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical
protein T07D10.3 protein.
Length = 377
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 124 KQEVNSGRVYVCTMCKKSCDEDK-WESHV 207
KQE + +YVCT C++ ++K ++SHV
Sbjct: 230 KQEERAYGLYVCTTCQRRFRDNKGFQSHV 258
>Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHI---ETIHKRAS-YVC 425
CGK+FK + QH+ ++++ + CT +C K H+ E IH ++C
Sbjct: 112 CGKRFKARGGLQQHMRIHNN--EKAYVCT----FCAKSFTQKSHLDQHERIHTGVKPFLC 165
Query: 426 PECNK 440
C +
Sbjct: 166 AFCGR 170
>Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHI---ETIHKRAS-YVC 425
CGK+FK + QH+ ++++ + CT +C K H+ E IH ++C
Sbjct: 178 CGKRFKARGGLQQHMRIHNN--EKAYVCT----FCAKSFTQKSHLDQHERIHTGVKPFLC 231
Query: 426 PECNK 440
C +
Sbjct: 232 AFCGR 236
>U53139-4|AAK18931.2| 369|Caenorhabditis elegans Serpentine
receptor, class w protein67 protein.
Length = 369
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 449 LQFFVAFWAYIRSSFVYCLYVSLQNSFIWTPYFTFCA 339
+ F+AFW + S Y + V++ WTP +CA
Sbjct: 160 ISMFLAFWVSLLVSVFYLIRVTITEVEPWTP-ADYCA 195
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 449 LQFFVAFWAYIRSSFVYCLYVSL 381
L FF+A +A+++S +C Y++L
Sbjct: 394 LSFFLAMYAHVKSGLSFCGYLTL 416
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 27.1 bits (57), Expect = 7.6
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Frame = +3
Query: 255 ECGKKFKFKKSYLQHIELNHSTLPNSVA------CTKSKIWCP--NETVLKGHIETIHKR 410
EC + F F+K+ H L+H + V C+K K P + GH++ K
Sbjct: 138 ECRESFNFEKNLKIHKILDHLKATDFVRGTICQFCSKDKTHAPFSRFSAYIGHVKVHLKS 197
Query: 411 ASYVCPECNKE 443
C +C E
Sbjct: 198 DDLECEQCGNE 208
>AC024859-9|ABQ13045.1| 296|Caenorhabditis elegans Hypothetical
protein Y71H2AM.14a protein.
Length = 296
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3
Query: 6 LLLHNSHSTFTWILGDMRSPPR-----IQEQKTQVKQRRSINRYQTRSKFWTSL 152
+L+ + HSTF W +G + + I+E + +R +N Y ++ WT L
Sbjct: 211 VLIASPHSTFGWWMGYLSKGNKVYYMDIRETNDPIYRRGELNPYDYFAENWTPL 264
>AC024859-8|ABQ13046.1| 337|Caenorhabditis elegans Hypothetical
protein Y71H2AM.14b protein.
Length = 337
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3
Query: 6 LLLHNSHSTFTWILGDMRSPPR-----IQEQKTQVKQRRSINRYQTRSKFWTSL 152
+L+ + HSTF W +G + + I+E + +R +N Y ++ WT L
Sbjct: 252 VLIASPHSTFGWWMGYLSKGNKVYYMDIRETNDPIYRRGELNPYDYFAENWTPL 305
>Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical
protein Y26G10.2 protein.
Length = 337
Score = 26.6 bits (56), Expect = 10.0
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = -3
Query: 491 LQPLVSYDELHETXLQFFVAFWAYIRSSF-VYCLYVSLQNSFIWTPYFTFCASNTIR*CG 315
L PL Y L +T F W + F + C ++ SF+ ++TF S R G
Sbjct: 33 LYPLTYYVVLFKTPKNFGSLKWFLVFHIFSITCQWLC---SFLLVNFYTFVPSKITRIDG 89
Query: 314 VIQFYVLKIALFELKLLATFLQQYCCLILELIRQIS 207
++ ++ LF + L CL+L R +S
Sbjct: 90 LLIDFIDINTLFTSMYVVYSLASSSCLLLFCNRILS 125
>Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical
protein C29F3.6 protein.
Length = 278
Score = 26.6 bits (56), Expect = 10.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 450 LTILCCILGIHTKLFCVLSLC 388
+ + C LG+ LFC+ S+C
Sbjct: 14 ILVFLCSLGVLINLFCIFSIC 34
>Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical
protein F43G6.4 protein.
Length = 270
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 79 NKKLKSSNADQSIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEI 213
N SS ++ K ++ C++C + E +W SH+E+
Sbjct: 66 NSDQASSRSESPQTKKLILDEDGCATCSVCTEKVPEAEWNSHIEL 110
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 142 GRVYVCTMCKKSCDEDKWESHV-----EICRISSNIKQQYCCKNVARSLSSKRAIFST 300
G +Y C +CKKS +++ R+ ++ K+QYCC S ++R + ST
Sbjct: 206 GELYQCQLCKKSISRHGQYANLLNHLSRHARLHAS-KKQYCCPKCGASF-TRRYLAST 261
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 142 GRVYVCTMCKKSCDEDKWESHV-----EICRISSNIKQQYCCKNVARSLSSKRAIFST 300
G +Y C +CKKS +++ R+ ++ K+QYCC S ++R + ST
Sbjct: 206 GELYQCQLCKKSISRHGQYANLLNHLSRHARLHAS-KKQYCCPKCGASF-TRRYLAST 261
>M98552-7|AAK82925.2| 355|Caenorhabditis elegans Hypothetical
protein ZK370.7 protein.
Length = 355
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 416 RSSFVYCLYVSLQNSFIWTPY 354
R SFV+ YV +FIWT Y
Sbjct: 36 RPSFVFKCYVIASMTFIWTAY 56
>AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform b protein.
Length = 339
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIET 398
C K F+FK + +H ++ P+ AC C + LK H+ T
Sbjct: 85 CSKSFRFKSNLFEHRSVHTGFTPH--ACPYCGKTCRLKGNLKKHLRT 129
>AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform a protein.
Length = 365
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 258 CGKKFKFKKSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKGHIET 398
C K F+FK + +H ++ P+ AC C + LK H+ T
Sbjct: 111 CSKSFRFKSNLFEHRSVHTGFTPH--ACPYCGKTCRLKGNLKKHLRT 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,901,581
Number of Sequences: 27780
Number of extensions: 239190
Number of successful extensions: 922
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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