Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0993
         (564 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   127   9e-30
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   127   9e-30
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   127   9e-30

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  127 bits (307), Expect = 9e-30
 Identities = 59/83 (71%), Positives = 64/83 (77%)
 Frame = +3

Query: 6   LREYXVIGRKXPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 185
           L+EY V+GRK PSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV    
Sbjct: 7   LKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQ 66

Query: 186 XXXXXXXXXXNFGIWLRYESRSG 254
                     NFGIWLRY+SRSG
Sbjct: 67  VYETSPVKIKNFGIWLRYDSRSG 89



 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 45/70 (64%), Positives = 50/70 (71%)
 Frame = +2

Query: 257 HNMYREYRDLSVGXAVTQCYRDMXXXXXXXXXSIQIIKVEVIXAAXCXRPQVKQFHNSTI 436
           HNMYREYRDL+VG AVTQCYRDM         SIQIIKV+ I AA   R  VKQFH+S I
Sbjct: 91  HNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKI 150

Query: 437 RFPXPKRVHH 466
           +FP  +RVHH
Sbjct: 151 KFPLVQRVHH 160


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  127 bits (307), Expect = 9e-30
 Identities = 59/83 (71%), Positives = 64/83 (77%)
 Frame = +3

Query: 6   LREYXVIGRKXPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 185
           L+EY V+GRK PSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV    
Sbjct: 7   LKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQ 66

Query: 186 XXXXXXXXXXNFGIWLRYESRSG 254
                     NFGIWLRY+SRSG
Sbjct: 67  VYETSPVKIKNFGIWLRYDSRSG 89



 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 45/70 (64%), Positives = 50/70 (71%)
 Frame = +2

Query: 257 HNMYREYRDLSVGXAVTQCYRDMXXXXXXXXXSIQIIKVEVIXAAXCXRPQVKQFHNSTI 436
           HNMYREYRDL+VG AVTQCYRDM         SIQIIKV+ I AA   R  VKQFH+S I
Sbjct: 91  HNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKI 150

Query: 437 RFPXPKRVHH 466
           +FP  +RVHH
Sbjct: 151 KFPLVQRVHH 160


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  127 bits (307), Expect = 9e-30
 Identities = 59/83 (71%), Positives = 64/83 (77%)
 Frame = +3

Query: 6   LREYXVIGRKXPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 185
           L+EY V+GRK PSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV    
Sbjct: 7   LKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQ 66

Query: 186 XXXXXXXXXXNFGIWLRYESRSG 254
                     NFGIWLRY+SRSG
Sbjct: 67  VYETSPVKIKNFGIWLRYDSRSG 89



 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 45/70 (64%), Positives = 50/70 (71%)
 Frame = +2

Query: 257 HNMYREYRDLSVGXAVTQCYRDMXXXXXXXXXSIQIIKVEVIXAAXCXRPQVKQFHNSTI 436
           HNMYREYRDL+VG AVTQCYRDM         SIQIIKV+ I AA   R  VKQFH+S I
Sbjct: 91  HNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKI 150

Query: 437 RFPXPKRVHH 466
           +FP  +RVHH
Sbjct: 151 KFPLVQRVHH 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,192,723
Number of Sequences: 53049
Number of extensions: 427641
Number of successful extensions: 1049
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)