Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0987
         (406 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical...    33   0.078
Z68336-5|CAA92740.3|  442|Caenorhabditis elegans Hypothetical pr...    31   0.24 
U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical pr...    31   0.42 
AL033510-2|CAA22065.1|  281|Caenorhabditis elegans Hypothetical ...    30   0.55 
Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical pr...    27   6.8  
U50311-15|AAA92317.1|  281|Caenorhabditis elegans Hypothetical p...    26   9.0  

>AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical
           protein Y45G12C.13 protein.
          Length = 384

 Score = 33.1 bits (72), Expect = 0.078
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 165 MELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDKAPSKTTIYRWFAEFQ 13
           ++L R + R ++ Y+FR G +  +    +  A G+ A S  T   WF +F+
Sbjct: 4   IKLERRDVRLLLLYEFRLGHSAMEAERNICGAMGEGALSYNTAKSWFQKFK 54


>Z68336-5|CAA92740.3|  442|Caenorhabditis elegans Hypothetical
           protein F22B3.8 protein.
          Length = 442

 Score = 31.5 bits (68), Expect = 0.24
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = -2

Query: 234 LFILKKILGLVTRFCQSCL------VVEKMELTRENSRAMIYYDFRSGLTQKQCVDRMIS 73
           +F+LKK + LV+ FC++ L      V EK+     +S  + Y  F+ GL  +    R I 
Sbjct: 231 VFLLKKPIMLVSEFCENYLQKSKVSVDEKLRFCLGSSCGLEYIHFK-GLIHRDLATRNIL 289

Query: 72  AFGDKAP 52
              DK P
Sbjct: 290 VSADKTP 296


>U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical
           protein R05G6.2 protein.
          Length = 339

 Score = 30.7 bits (66), Expect = 0.42
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -2

Query: 165 MELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDKAPSKTTIYRWFAEFQ 13
           ++L R + R ++ Y+FR G +  +    +  A G+ A S  T   WF + +
Sbjct: 4   IKLERRDVRLLLLYEFRLGHSAMEAERNICGAMGEGALSYNTAKSWFQKLK 54


>AL033510-2|CAA22065.1|  281|Caenorhabditis elegans Hypothetical
           protein Y40H7A.2 protein.
          Length = 281

 Score = 30.3 bits (65), Expect = 0.55
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -2

Query: 165 MELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDKAPSKTTIYRWF 25
           ++L R + R ++ Y+FR G +  +    +  A G+ A S  T   WF
Sbjct: 4   IKLERRDVRLLLLYEFRLGHSAMEAERNICGAMGEGALSYNTAKSWF 50


>Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical
           protein ZK632.2 protein.
          Length = 710

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +3

Query: 66  QMQKSSGQHTVFVLNHFESHNKSSLLNFLESIPFSQRLNNFDKTS*QDRESFLK*INGIR 245
           +M+KS  +  +    H ES     L+   +     + L   + T+  DR++FLK + G+R
Sbjct: 474 KMEKSKWRQKLMAATH-ESQKLEKLVKIAKPAVV-KGLEQLETTAANDRQAFLKKLMGVR 531

Query: 246 FLKQ 257
             K+
Sbjct: 532 ARKE 535


>U50311-15|AAA92317.1|  281|Caenorhabditis elegans Hypothetical
           protein C25E10.12 protein.
          Length = 281

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 283 LKSF*LKTPCFKNRIPFIYFKKDSRSCHEVL 191
           +K   L TP F+N++ F+         HE+L
Sbjct: 32  IKPMRLDTPIFENKVRFVCISDTHEKLHEIL 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,665,536
Number of Sequences: 27780
Number of extensions: 163253
Number of successful extensions: 336
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)