Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0986
         (712 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0494 + 3931664-3931830,3932034-3932151,3932661-3932896,393...    31   0.68 
03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856     30   2.1  
11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502     28   6.4  
10_07_0152 + 13439178-13439517,13440072-13440229,13440431-134404...    28   6.4  
11_06_0092 + 19973364-19975983,19976272-19976648                       28   8.4  
04_04_1551 - 34348110-34348225,34348468-34348606,34348658-343488...    28   8.4  

>12_01_0494 +
           3931664-3931830,3932034-3932151,3932661-3932896,
           3932992-3933225,3933659-3933797,3933878-3934096,
           3934148-3934220,3934319-3934428
          Length = 431

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -3

Query: 614 GAQERIETFHLISDRYGHRIPFQSLLVFNPHRVFVCLSPTGCTICHLAVSASCI 453
           GA+E    F L  D Y H + + ++ + NP R +     TG  +  L   A C+
Sbjct: 38  GAEESSAVFPLYGDVYPHGLYYVAMSIGNPPRPYFLDVDTGSDLTWLQCDAPCV 91


>03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856
          Length = 1002

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +3

Query: 189 NCMSHSMLGTTVR--TANQESITMRYGQDLPVHVSGLPTLRYFYKDRSGHNGN 341
           NCM  S+L  T +    N     M  G  +P  V+ LP LR  +  R+G  GN
Sbjct: 267 NCMDLSVLVLTSQFDAVNLSEFNMFIG-GIPESVTALPKLRMLWAPRAGFEGN 318


>11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502
          Length = 1385

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 280 TSAVYPPYGTSIKIAPVTTETEMNKETCLQVNSTQDQLQDIQ 405
           T+A  P  GTS  +A  TT T  +K+   ++     +LQD+Q
Sbjct: 412 TTAPSPGVGTSHDVATATTTTTFDKDQIEEMIYIHMELQDMQ 453


>10_07_0152 +
           13439178-13439517,13440072-13440229,13440431-13440477,
           13441115-13441178,13441600-13442237,13442328-13442562
          Length = 493

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 119 DKGSPPQWSPVYTVKGLLNIPYAELHEP 202
           D GS  +W P+    G +N P   LH P
Sbjct: 391 DSGSTSEWRPLIKKYGYVNCPTVRLHIP 418


>11_06_0092 + 19973364-19975983,19976272-19976648
          Length = 998

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 490 VPSAIWPCRH-PALFLCRYI*NRSCPVALTGCLG---ADLASN*LAGTSPCS 347
           +PS I  C+    LFL     N S P+ALT   G    DL+ N L+G  P S
Sbjct: 511 IPSTIGECQLLQHLFLQNNFLNGSIPIALTQLKGLDTLDLSGNNLSGQIPMS 562


>04_04_1551 -
           34348110-34348225,34348468-34348606,34348658-34348896,
           34349042-34349140,34349207-34350188,34350737-34350832,
           34350936-34351064,34351253-34351332,34351420-34351661,
           34351743-34352692
          Length = 1023

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 39  DLRRSAVESCYSLRCCVFSWPSHLDMSIK 125
           D+  S V+ C + +C V  WPSHL   I+
Sbjct: 356 DIYDSGVDDCSNPKCYVM-WPSHLSTHIR 383


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,205,539
Number of Sequences: 37544
Number of extensions: 409419
Number of successful extensions: 1045
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)