Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0986
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48245-1|CAA88290.1|  356|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z48245-1|CAA88290.1|  356|Caenorhabditis elegans Hypothetical
           protein T27D1.3 protein.
          Length = 356

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
 Frame = -3

Query: 485 ICHLAVS--ASCIVSVPIYLKSVMSGSTDWMSWS*SCVELTCRHVS-LFISVSVVTGAI 318
           + +LAV+  A+ I ++P ++  V  GSTDW+  S  C    CR++  +F+  S+ T  I
Sbjct: 57  LLNLAVADLANLIFTIPEWIPPVFFGSTDWLFPSFLCP--VCRYLECVFLFASISTQMI 113


>Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical
           protein C29F3.1 protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 325 PVTTETEMNKETCLQVNSTQDQLQDIQSV 411
           P TTE  +NK    ++N T D+LQ  QSV
Sbjct: 49  PNTTENVLNKALFAEMNETLDRLQSDQSV 77


>Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical
           protein F41E7.6 protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 355 ETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAK 477
           +TCLQ  S+Q++   +Q V+P   +F   G+ + + ++  +
Sbjct: 318 KTCLQAESSQNKSSSMQPVMPVKIEFLLTGSVSQKISEAER 358


>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +1

Query: 7   NIFQLFLEIT*IYVGRRSNHVIRCVVVFFRGLRIWICR*RVATTMESSIHSKGTPKYT 180
           N+FQ+FLE+  +  G RS  V++      +GL    C   V    + S +SK  PKYT
Sbjct: 137 NLFQIFLELFTLSSGCRSCQVLK-TSTLGKGLP---CGRDVEGVWKGSRNSKCKPKYT 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,292,080
Number of Sequences: 27780
Number of extensions: 352235
Number of successful extensions: 1011
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)