Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0983
         (414 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   3.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   8.3  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 124 LVMSPEHSPSFRKVPDW 74
           L M   H+P++ +V DW
Sbjct: 660 LAMWLNHNPNYAEVTDW 676


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 58  LLLLKGVHHLYSLHLL 11
           LLLL  +++ Y +HLL
Sbjct: 252 LLLLVCIYYFYYMHLL 267


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 274 VLLGIYCLYVKSCFI 318
           V+LG  C+Y+ S +I
Sbjct: 37  VILGTTCIYLTSLYI 51


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 274 VLLGIYCLYVKSCFI 318
           V+LG  C+Y+ S +I
Sbjct: 37  VILGTTCIYLTSLYI 51


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 229 VIHNKLINNTNINWLLV*TVTKVSQIQS*TGLQD 128
           +I ++   N NI  ++     ++SQ QS T L D
Sbjct: 72  IIKSRAAGNNNIQRVVPEIKIQISQQQSVTALLD 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,982
Number of Sequences: 336
Number of extensions: 1483
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)