Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0983
         (414 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688...    31   0.36 
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259           28   2.6  
02_01_0171 - 1179095-1179388,1179668-1179801,1180036-1180900,118...    27   4.5  
05_07_0154 - 28059097-28060641                                         27   5.9  
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676...    27   7.8  
03_05_0778 - 27638380-27639906                                         27   7.8  

>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
            12568932-12569175,12569480-12569766,12570618-12571103,
            12571348-12571459,12571540-12571745,12573071-12573276,
            12573831-12574162,12574284-12574825,12574967-12576308,
            12576386-12576457,12578438-12578505,12579011-12580174
          Length = 1808

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 36   CTPFSNSR-VIELDQSGTLRKLGECSGDITS*SCKPV 143
            CTP    + V +L   GTLR +GEC+ ++ +  C P+
Sbjct: 1094 CTPRDRLKYVAKLASEGTLRAMGECAAEMCAPYCLPL 1130


>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
          Length = 359

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 28  IDDVHPLVIAGSLNWTNQALCGNWENVLVTSQADLVNQ 141
           +D  HP+  AG L W    LCG WE   + +Q + +++
Sbjct: 101 VDSTHPVFAAGDLVW---GLCG-WEEYSLITQPETLHK 134


>02_01_0171 -
           1179095-1179388,1179668-1179801,1180036-1180900,
           1180998-1181258,1181424-1181621,1181752-1181982,
           1185337-1185648,1185750-1186247
          Length = 930

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +1

Query: 1   KFCIIDAVNIDDVHPLVIAGSLNWTNQALCGNWENVLVTSQADLVNQFKTEFEKLWLQFT 180
           +F I++  ++  +HPLV+ G   +T  A    W+   V +  D +N+ K + +      T
Sbjct: 73  EFGILEGRSVALLHPLVMGGLFAYTLWAGYLGWQWRRVRTIQDEINELKKQLKPAAAAAT 132

Query: 181 P 183
           P
Sbjct: 133 P 133


>05_07_0154 - 28059097-28060641
          Length = 514

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 103 SPSFRKVPDWSSSMTLLLLKGVHHLYSLHLL 11
           +PS R++PD+  S+ L  +K  +H    HLL
Sbjct: 12  TPSHRRLPDFLQSVNLKYVKLGYHYLITHLL 42


>10_08_0197 +
           15666873-15666916,15667098-15667177,15667490-15667604,
           15667698-15667786,15667850-15667978,15670362-15670492
          Length = 195

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 25  NIDDVHPLVIAGSLNWTNQALCGNWENVLVTSQADLVNQFKTEFEKLWLQFTP 183
           N+D++   V    +N T   + G    VLV    DLVN F+    +L L   P
Sbjct: 76  NVDEMSGSVCLDVINQTWSPMFGEITLVLVIISTDLVNVFEVFLPQLLLYPNP 128


>03_05_0778 - 27638380-27639906
          Length = 508

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 36  CTPFSNSRVIELDQSGTLR 92
           C PF  +R+I++D  G LR
Sbjct: 66  CAPFDGNRIIQIDVRGLLR 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,304,865
Number of Sequences: 37544
Number of extensions: 126526
Number of successful extensions: 267
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)