Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0982
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    26   0.67 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   1.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   1.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   4.7  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   6.3  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   6.3  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 341 CCPATWTSLMSNQEYVGTKTARCWETVRTR 430
           CC       + +++  GT+T  CW   RTR
Sbjct: 360 CCEQQHLPHVHSEKCAGTQTGECWIGSRTR 389


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 226 NVVTKYMLFKLMCTHLLQCERQFKSVPVTVKSYKDETV 339
           N+  +Y + KLM   +++ E Q+ ++    K  K ETV
Sbjct: 608 NIFNRYPMLKLMIKDVIRLETQYWTLVEIPKQEKLETV 645


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 226 NVVTKYMLFKLMCTHLLQCERQFKSVPVTVKSYKDETV 339
           N+  +Y + KLM   +++ E Q+ ++    K  K ETV
Sbjct: 608 NIFNRYPMLKLMIKDVIRLETQYWTLVEIPKQEKLETV 645


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +2

Query: 347  PATWTSLMSNQEYVGTKTARCWE 415
            P  W+++    + + +K  RCW+
Sbjct: 1000 PTNWSNVCEAAKRITSKLQRCWD 1022


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 427 PGHAPTSSSANARQLQHTDQRNQ 495
           P   P  SSA  +Q Q   QRNQ
Sbjct: 205 PTPLPRRSSAQPQQQQQQQQRNQ 227


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 427 PGHAPTSSSANARQLQHTDQRNQ 495
           P   P  SSA  +Q Q   QRNQ
Sbjct: 181 PTPLPRRSSAQPQQQQQQQQRNQ 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,764
Number of Sequences: 2352
Number of extensions: 10761
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)