Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0982
(524 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY047524-1|AAK77256.1| 500|Drosophila melanogaster GH03113p pro... 49 3e-06
AF134113-1|AAD24192.1| 500|Drosophila melanogaster wrapper prot... 49 3e-06
AE013599-3385|AAF46838.2| 500|Drosophila melanogaster CG10382-P... 49 3e-06
AY047563-1|AAK77295.1| 1721|Drosophila melanogaster GH07636p pro... 31 1.3
AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin pr... 31 1.3
AF040989-1|AAC38849.1| 1395|Drosophila melanogaster roundabout 1... 31 1.3
AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE... 31 1.3
AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC... 31 1.3
AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD... 31 1.3
AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA... 31 1.3
AE013599-3446|AAF46887.1| 1395|Drosophila melanogaster CG13521-P... 31 1.3
AE013599-3445|AAM71113.2| 1429|Drosophila melanogaster CG13521-P... 31 1.3
BT024954-1|ABE01184.1| 571|Drosophila melanogaster IP15822p pro... 29 2.9
BT003586-1|AAR88555.1| 2558|Drosophila melanogaster LD10678p pro... 29 2.9
AY051656-1|AAK93080.1| 1098|Drosophila melanogaster LD11008p pro... 29 5.1
AF275903-1|AAG60004.1| 1332|Drosophila melanogaster echinoid pro... 29 5.1
AF257313-1|AAF90131.1| 210|Drosophila melanogaster stretchin-ML... 29 5.1
AF254366-1|AAF90115.1| 210|Drosophila melanogaster stretchin-ML... 29 5.1
AE014134-697|AAF51045.2| 1332|Drosophila melanogaster CG12676-PA... 29 5.1
AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p pro... 28 6.7
AF254369-1|AAF90117.1| 231|Drosophila melanogaster stretchin-ML... 28 6.7
AF254364-1|AAF90113.1| 202|Drosophila melanogaster stretchin-ML... 28 6.7
AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin recep... 28 6.7
AE014298-1046|AAG22412.1| 667|Drosophila melanogaster CG11369-P... 28 6.7
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P... 28 6.7
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 28 6.7
AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA... 28 6.7
AY075313-1|AAL68180.1| 355|Drosophila melanogaster GH02315p pro... 28 8.9
AY061010-1|AAL28558.1| 57|Drosophila melanogaster HL02501p pro... 28 8.9
AE014298-2494|AAF48676.2| 355|Drosophila melanogaster CG4872-PA... 28 8.9
>AY047524-1|AAK77256.1| 500|Drosophila melanogaster GH03113p
protein.
Length = 500
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGHAP 441
L+ ++FKS+P TVK+Y+++TV LPC L+ VRW++D L DS+ P P
Sbjct: 31 LENSQKFKSIPTTVKTYENDTVQLPCTLNTP--FRYVRWHRDDVALVDSRHPELPP 84
>AF134113-1|AAD24192.1| 500|Drosophila melanogaster wrapper protein
protein.
Length = 500
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGHAP 441
L+ ++FKS+P TVK+Y+++TV LPC L+ VRW++D L DS+ P P
Sbjct: 31 LENSQKFKSIPTTVKTYENDTVQLPCTLNTP--FRYVRWHRDDVALVDSRHPELPP 84
>AE013599-3385|AAF46838.2| 500|Drosophila melanogaster CG10382-PA
protein.
Length = 500
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGHAP 441
L+ ++FKS+P TVK+Y+++TV LPC L+ VRW++D L DS+ P P
Sbjct: 31 LENSQKFKSIPTTVKTYENDTVQLPCTLNTP--FRYVRWHRDDVALVDSRHPELPP 84
>AY047563-1|AAK77295.1| 1721|Drosophila melanogaster GH07636p protein.
Length = 1721
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
L C+ +F + + E ++L CY+ + D +P++ W K+G L S
Sbjct: 1416 LMCKPEFTKPLHDLTIHDGEQLILTCYV-KGDPEPQISWSKNGKSLSSS 1463
>AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin
protein.
Length = 6658
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
L C+ +F + + E ++L CY+ + D +P++ W K+G L S
Sbjct: 6353 LMCKPEFTKPLHDLTIHDGEQLILTCYV-KGDPEPQISWSKNGKSLSSS 6400
>AF040989-1|AAC38849.1| 1395|Drosophila melanogaster roundabout 1
protein.
Length = 1395
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 292 FKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSK 423
F+ P + K ET LL C + +P + W KDG L D K
Sbjct: 157 FRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLK 200
>AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE,
isoform E protein.
Length = 8647
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
L C+ +F + + E ++L CY+ + D +P++ W K+G L S
Sbjct: 8342 LMCKPEFTKPLHDLTIHDGEQLILTCYV-KGDPEPQISWSKNGKSLSSS 8389
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 280 CERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
C+ + K + +T L L ++D K +V WYK T++ ++KD
Sbjct: 469 CKPEISRKLADQKVAESKTFELLVSLSQTDRKCKVEWYKGSTVIRETKD 517
>AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC,
isoform C protein.
Length = 8648
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
L C+ +F + + E ++L CY+ + D +P++ W K+G L S
Sbjct: 8343 LMCKPEFTKPLHDLTIHDGEQLILTCYV-KGDPEPQISWSKNGKSLSSS 8390
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 280 CERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
C+ + K + +T L L ++D K +V WYK T++ ++KD
Sbjct: 529 CKPEISRKLADQKVAESKTFELLVSLSQTDRKCKVEWYKGSTVIRETKD 577
>AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD,
isoform D protein.
Length = 8930
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
L C+ +F + + E ++L CY+ + D +P++ W K+G L S
Sbjct: 8625 LMCKPEFTKPLHDLTIHDGEQLILTCYV-KGDPEPQISWSKNGKSLSSS 8672
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 280 CERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
C+ + K + +T L L ++D K +V WYK T++ ++KD
Sbjct: 741 CKPEISRKLADQKVAESKTFELLVSLSQTDRKCKVEWYKGSTVIRETKD 789
>AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA,
isoform A protein.
Length = 8943
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 274 LQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
L C+ +F + + E ++L CY+ + D +P++ W K+G L S
Sbjct: 8638 LMCKPEFTKPLHDLTIHDGEQLILTCYV-KGDPEPQISWSKNGKSLSSS 8685
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 280 CERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
C+ + K + +T L L ++D K +V WYK T++ ++KD
Sbjct: 765 CKPEISRKLADQKVAESKTFELLVSLSQTDRKCKVEWYKGSTVIRETKD 813
>AE013599-3446|AAF46887.1| 1395|Drosophila melanogaster CG13521-PA,
isoform A protein.
Length = 1395
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 292 FKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSK 423
F+ P + K ET LL C + +P + W KDG L D K
Sbjct: 157 FRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLK 200
>AE013599-3445|AAM71113.2| 1429|Drosophila melanogaster CG13521-PB,
isoform B protein.
Length = 1429
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 292 FKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSK 423
F+ P + K ET LL C + +P + W KDG L D K
Sbjct: 191 FRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLK 234
>BT024954-1|ABE01184.1| 571|Drosophila melanogaster IP15822p
protein.
Length = 571
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 280 CERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
C+ + K + +T L L ++D K +V WYK T++ ++KD
Sbjct: 469 CKPEISRKLADQKVAESKTFELLVSLSQTDRKCKVEWYKGSTVIRETKD 517
>BT003586-1|AAR88555.1| 2558|Drosophila melanogaster LD10678p
protein.
Length = 2558
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 280 CERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
C+ + K + +T L L ++D K +V WYK T++ ++KD
Sbjct: 529 CKPEISRKLADQKVAESKTFELLVSLSQTDRKCKVEWYKGSTVIRETKD 577
>AY051656-1|AAK93080.1| 1098|Drosophila melanogaster LD11008p
protein.
Length = 1098
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 325 KDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
+D T L C +D P VRW ++G + S
Sbjct: 33 RDRTAKLECNVDAKPKVPNVRWNRNGRFISSS 64
>AF275903-1|AAG60004.1| 1332|Drosophila melanogaster echinoid
protein.
Length = 1332
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 325 KDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
+D T L C +D P VRW ++G + S
Sbjct: 267 RDRTAKLECNVDAKPKVPNVRWNRNGRFISSS 298
>AF257313-1|AAF90131.1| 210|Drosophila melanogaster stretchin-MLCK
protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 LQCERQF-KSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
++C +F K +P K+ + L C + + +P+V W+KDG L S +
Sbjct: 143 VECLPEFVKILPGQAKALLGSSFTLQCNMRGAP-RPQVTWFKDGIXLSSSSE 193
>AF254366-1|AAF90115.1| 210|Drosophila melanogaster stretchin-MLCK
protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 LQCERQF-KSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
++C +F K +P K+ + L C + + +P+V W+KDG L S +
Sbjct: 143 VECLPEFVKILPGQAKALLGSSFTLQCNMRGAP-RPQVTWFKDGIXLSSSSE 193
>AE014134-697|AAF51045.2| 1332|Drosophila melanogaster CG12676-PA
protein.
Length = 1332
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 325 KDETVLLPCYLDESDVKPRVRWYKDGTLLGDS 420
+D T L C +D P VRW ++G + S
Sbjct: 267 RDRTAKLECNVDAKPKVPNVRWNRNGRFISSS 298
>AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p
protein.
Length = 1072
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 268 HLLQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGHAPTS 447
H+ + F P +++ L C +P++ W+K+ ++ +PG ++
Sbjct: 226 HIAYIRKSFNQSPTSLRLELGSRAELRCEPPGGFPEPKLTWHKNNAVITADSEPGITVSA 285
Query: 448 SSANARQ--LQH 477
+ RQ LQH
Sbjct: 286 GTLIFRQVALQH 297
>AF254369-1|AAF90117.1| 231|Drosophila melanogaster stretchin-MLCK
protein.
Length = 231
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 LQCERQF-KSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
++C +F K +P K+ + L C + + +P+V W+KDG L S +
Sbjct: 145 VECLPEFVKILPGQAKALLGSSFTLQCNMRGAP-RPQVTWFKDGIQLSSSSE 195
>AF254364-1|AAF90113.1| 202|Drosophila melanogaster stretchin-MLCK
protein.
Length = 202
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 LQCERQF-KSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
++C +F K +P K+ + L C + + +P+V W+KDG L S +
Sbjct: 116 VECLPEFVKILPGQAKALLGSSFTLQCNMRGAP-RPQVTWFKDGIQLSSSSE 166
>AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin receptor
DUnc5 protein.
Length = 1072
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 268 HLLQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGHAPTS 447
H+ + F P +++ L C +P++ W+K+ ++ +PG ++
Sbjct: 226 HIAYIRKSFNQSPTSLRLELGSRAELRCEPPGGFPEPKLTWHKNNAVITADSEPGITVSA 285
Query: 448 SSANARQ--LQH 477
+ RQ LQH
Sbjct: 286 GTLIFRQVALQH 297
>AE014298-1046|AAG22412.1| 667|Drosophila melanogaster CG11369-PA
protein.
Length = 667
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 367 DVKPRVRWYKDGTLLGDSKDPGHAPTSSSANARQLQHTDQRNQGIGHPAYT 519
DVK R + K G + ++ PT SA + H ++ Q + P YT
Sbjct: 392 DVKRREKSGKGGKIQHSARSTKVEPTKISAQIKATSHVGRQMQRVNFPWYT 442
>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
isoform C protein.
Length = 4463
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 LQCERQF-KSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
++C +F K +P K+ + L C + + +P+V W+KDG L S +
Sbjct: 2525 VECLPEFVKILPGQAKALLGSSFTLQCNMRGAP-RPQVTWFKDGIQLSSSSE 2575
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 LQCERQF-KSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKD 426
++C +F K +P K+ + L C + + +P+V W+KDG L S +
Sbjct: 7332 VECLPEFVKILPGQAKALLGSSFTLQCNMRGAP-RPQVTWFKDGIQLSSSSE 7382
>AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA
protein.
Length = 1072
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 268 HLLQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGHAPTS 447
H+ + F P +++ L C +P++ W+K+ ++ +PG ++
Sbjct: 226 HIAYIRKSFNQSPTSLRLELGSRAELRCEPPGGFPEPKLTWHKNNAVITADSEPGITVSA 285
Query: 448 SSANARQ--LQH 477
+ RQ LQH
Sbjct: 286 GTLIFRQVALQH 297
>AY075313-1|AAL68180.1| 355|Drosophila melanogaster GH02315p
protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +1
Query: 208 NFSAA*NVVTKYMLFKLMCTHLLQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVR 387
N A V+T ++ K + + L+ +Q P T +++ + +PC + V +
Sbjct: 10 NADAVRQVLTWPLVNKAVESALVAIVKQNPETPSTSFAFQPKRTFIPCGKEPGKVLLTMP 69
Query: 388 WYKDGTLLGDSKDPGHAPTSSSANARQL 471
Y L S+DPG + S A +L
Sbjct: 70 AYVGNYRLESSRDPGEVEHTHSTLACKL 97
>AY061010-1|AAL28558.1| 57|Drosophila melanogaster HL02501p
protein.
Length = 57
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 243 IFSDHILSCTEIARIFV-FVGNKSKVICCKCCSQT 142
+F HILSC + R+++ V + +I KCC++T
Sbjct: 5 VFVFHILSCLYLLRVYLCCVRSFIYLIISKCCNKT 39
>AE014298-2494|AAF48676.2| 355|Drosophila melanogaster CG4872-PA
protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +1
Query: 208 NFSAA*NVVTKYMLFKLMCTHLLQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVR 387
N A V+T ++ K + + L+ +Q P T +++ + +PC + V +
Sbjct: 10 NADAVRQVLTWPLVNKAVESALVAIVKQNPETPSTSFAFQPKRTFIPCGKEPGKVLLTMP 69
Query: 388 WYKDGTLLGDSKDPGHAPTSSSANARQL 471
Y L S+DPG + S A +L
Sbjct: 70 AYVGNYRLESSRDPGEVEHTHSTLACKL 97
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,861,883
Number of Sequences: 53049
Number of extensions: 443728
Number of successful extensions: 1707
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -