Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0981
(430 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 124 3e-29
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 124 3e-29
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 124 3e-29
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 124 3e-29
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 124 3e-29
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 124 3e-29
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 124 3e-29
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 124 3e-29
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 124 3e-29
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 124 3e-29
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 124 4e-29
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 117 4e-27
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 117 4e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 116 1e-26
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 116 1e-26
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 82 2e-16
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 63 9e-11
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 58 4e-09
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 36 0.009
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.028
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.028
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 30 0.61
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.3
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.3
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.3
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.3
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 5.7
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 5.7
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 27 5.7
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 27 5.7
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 27 5.7
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 26 10.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 116 bits (278), Expect = 1e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC ++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 114 bits (274), Expect = 3e-26
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC ++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 70
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 222 MVGMGQKDSYV 254
MVGMGQKDSYV
Sbjct: 1 MVGMGQKDSYV 11
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 100
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 41
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT APL P+
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 124 bits (298), Expect = 4e-29
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLQPQ 430
DEAQ KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLT APL P+
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 113
Score = 112 bits (270), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 66.5 bits (155), Expect = 8e-12
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQ KRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 117 bits (281), Expect = 4e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 66.5 bits (155), Expect = 8e-12
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQ KRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 116 bits (278), Expect = 1e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC ++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 66.5 bits (155), Expect = 8e-12
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQ KRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 116 bits (278), Expect = 1e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MC ++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 60.9 bits (141), Expect = 4e-10
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 257 DEAQXKRGILTLKYPIEHGIVTNWDDM 337
DEAQ KRGILTLKYPIEHGIVTNWDDM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 81.8 bits (193), Expect = 2e-16
Identities = 33/57 (57%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 260 EAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTXAPLQP 427
+A+ RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT APL P
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNP 116
Score = 52.4 bits (120), Expect = 1e-07
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFI 57
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 62.9 bits (146), Expect = 9e-11
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 394
R G + L+ +E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 395 PVLLTXAPLQP 427
+LLT PL P
Sbjct: 106 KLLLTEPPLNP 116
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 57.6 bits (133), Expect = 4e-09
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +2
Query: 287 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPL 421
T+KYPI HGIV +WD ME+ W + LR PE+H LLT PL
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPL 124
Score = 37.1 bits (82), Expect = 0.005
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 90 MCXEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 36.3 bits (80), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 302 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 409
++ G++ +W+ EKI H++ N L P EHPVL +
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFS 129
Score = 33.5 bits (73), Expect = 0.066
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.028
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 254 RDEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
++E K + ++ PIE G V NWD ++IW TF
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.028
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 254 RDEAQXKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
++E K + ++ PIE G V NWD ++IW TF
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 30.3 bits (65), Expect = 0.61
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 351 CQIFSMSSQLVTIPC-SMGYLRVRIP---LXLCASSLHKSPSVPYRPSRPDG 208
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 194 RGKAPPSGRDGRYGTEGLLCRDEAQXKRG 280
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQG 218
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 397
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 397
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 44 IYLFIIELFN*KLIQDVRXRSCXVGSRQWLR-YVQGXXXXXXXXXXXVPLDRGKAPPSGR 220
++L +IE N + Q + S V + ++ Y+ G + ++ GK+ P
Sbjct: 177 LFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFGINDKITIE-GKSKPGSD 235
Query: 221 DGRYGTEGLLCRDEAQXKRGILTLKYPIEHGI 316
D + + D+ Q + + K+ EH I
Sbjct: 236 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAI 267
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 44 IYLFIIELFN*KLIQDVRXRSCXVGSRQWLR-YVQGXXXXXXXXXXXVPLDRGKAPPSGR 220
++L +IE N + Q + S V + ++ Y+ G + ++ GK+ P
Sbjct: 171 LFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFGINDKITIE-GKSKPGSD 229
Query: 221 DGRYGTEGLLCRDEAQXKRGILTLKYPIEHGI 316
D + + D+ Q + + K+ EH I
Sbjct: 230 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAI 261
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 44 IYLFIIELFN*KLIQDVRXRSCXVGSRQWLR-YVQGXXXXXXXXXXXVPLDRGKAPPSGR 220
++L +IE N + Q + S V + ++ Y+ G + ++ GK+ P
Sbjct: 177 LFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFGINDKITIE-GKSKPGSD 235
Query: 221 DGRYGTEGLLCRDEAQXKRGILTLKYPIEHGI 316
D + + D+ Q + + K+ EH I
Sbjct: 236 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAI 267
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 323 NWDDMEKIWHHTFYNE--LRVAPEEHPV 400
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 314 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXA 415
++ NWD EK W TF+ L+ E P+ L A
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCI-REMPIPLHLA 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,050,855
Number of Sequences: 27780
Number of extensions: 208640
Number of successful extensions: 812
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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