Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0980
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 477 KSGQRRRAGANCTNDLHVRLMS 412
           KSG R    ANC+ DL+  +++
Sbjct: 708 KSGNRLARPANCSPDLYAVMLN 729


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 438 WCSSPQPAFAVRSXT 482
           WCSS QP  +  + T
Sbjct: 235 WCSSSQPVLSTTNST 249


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 333 LSAGGERYGSTPVLATRPPSHMTLYGSSSDVREGRWCSSPQP 458
           L A  E   S PV    PP+ +    ++  V E     +P P
Sbjct: 12  LGASAEDDTSGPVFVREPPNRIDFSNTTGAVVECSAHGNPTP 53


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 132 YRFTYN*ACKKDTYHKVRCRCTIRLLLKLLFVS 34
           Y++TYN      T + V     +R+  KL  V+
Sbjct: 43  YKYTYNIVAVSLTAYMVYITTNLRITQKLSIVT 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,260
Number of Sequences: 336
Number of extensions: 2371
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)