Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0979
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 147 1e-36
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 86 4e-18
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 79 8e-16
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 77 3e-15
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 73 3e-14
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 70 3e-13
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 69 8e-13
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 66 3e-12
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 65 7e-12
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 60 4e-10
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 59 5e-10
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 55 1e-08
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 48 2e-06
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.049
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 2.4
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 27 3.2
SPAC3H8.04 |||chromosome segregation protein|Schizosaccharomyces... 27 3.2
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 5.6
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.4
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 9.8
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 147 bits (357), Expect = 1e-36
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +1
Query: 256 LNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 435
L+LM W+ IPGK T WEGGLYKL M F ++YP+ PPKC+F PPLFHPNVYPSGTVCLS
Sbjct: 36 LDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLS 95
Query: 436 LLDEEKDWRPAITIKQILLGIQDL 507
+L+EE+ W+PAITIKQILLGIQDL
Sbjct: 96 ILNEEEGWKPAITIKQILLGIQDL 119
Score = 39.9 bits (89), Expect = 3e-04
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 191 KXWRKDHPFGFVARPMKNPDG 253
K WR+DHPFGF A+P K+ DG
Sbjct: 14 KQWRRDHPFGFYAKPCKSSDG 34
Score = 35.1 bits (77), Expect = 0.009
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 477 KANFVGYSRSSNEPNVKDPAQVKAYTIYCQNRLEYDK 587
K +G ++PN+ PAQ +AYT++ ++++EY+K
Sbjct: 110 KQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEK 146
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 86.2 bits (204), Expect = 4e-18
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
+ TW+C I G GTP+EGGLY + F DYP PP KFE FHPNVY GTVC+S+
Sbjct: 34 DFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISI 93
Query: 439 LDEEKD-----------WRPAITIKQILLGIQDL 507
L D W P ++++ILL + +
Sbjct: 94 LHAPGDDPNMYESSSERWSPVQSVEKILLSVMSM 127
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 78.6 bits (185), Expect = 8e-16
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
N+M W I G TP+E G +KL + F + YP+ PP KF +FHPNVY +G +CL +
Sbjct: 32 NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDI 91
Query: 439 LDEEKDWRPAITIKQILLGIQDL 507
L + W P + IL IQ L
Sbjct: 92 L--QNRWSPTYDVAAILTSIQSL 112
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 76.6 bits (180), Expect = 3e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
+L W+ I G +P+ GG++ L + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDI 88
Query: 439 LDEEKDWRPAITIKQILLGIQDL 507
L ++ W PA+TI ++LL I L
Sbjct: 89 LRDQ--WSPALTISKVLLSICSL 109
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 73.3 bits (172), Expect = 3e-14
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
NL ++ + G + + +EGG + L + D+YP PP +F ++HPNV G +CLS
Sbjct: 30 NLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLST 89
Query: 439 LDEEKDWRPAITIKQILLGIQDL 507
L +KDW PA+ I+ +LL IQ L
Sbjct: 90 L--KKDWSPALQIRTVLLSIQAL 110
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 69.7 bits (163), Expect = 3e-13
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
NL+ W I G T +EG +K+ M F +YP SPP F P++HPNV SG +CL +
Sbjct: 57 NLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDI 116
Query: 439 LDEEKDWRPAITIKQILLGIQDL 507
L ++ W ++ ILL +Q L
Sbjct: 117 LKDK--WSAVYNVQTILLSLQSL 137
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 68.5 bits (160), Expect = 8e-13
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
++ WE I G + T +EGG + + F DYP PPK KF ++HPNV+P+G VC+S+
Sbjct: 34 SIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISI 93
Query: 439 LDEEKD 456
L D
Sbjct: 94 LHPPGD 99
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 66.5 bits (155), Expect = 3e-12
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 289 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 465
G +GTP+EGG + + + DYP PPK F+ ++HPNV +G +CL +L ++ W P
Sbjct: 42 GPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ--WSP 99
Query: 466 AITIKQILLGIQDL 507
T+K L+ +Q L
Sbjct: 100 VYTMKSALISLQSL 113
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 65.3 bits (152), Expect = 7e-12
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 307 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQI 486
++GG +K R+ D+YP PPK K ++HPN+ G VCL++L +DW P + + I
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL--RQDWNPVLNLNSI 122
Query: 487 LLGIQDLPMS 516
L+G+Q L +S
Sbjct: 123 LVGLQFLFLS 132
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 59.7 bits (138), Expect = 4e-10
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
NL W C G + + GG + + F DYP PP +F ++HPN G VCL++
Sbjct: 35 NLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAI 94
Query: 439 LDEEKDWRPAITIKQILLGIQDL 507
L +++ ++P+I ++ +L I L
Sbjct: 95 L-KQQVFKPSIKLRSVLEQILQL 116
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 59.3 bits (137), Expect = 5e-10
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 432
+++ W+ I G TP+EGG + L + + YP SPP F+ + HPN+ + +G VC+
Sbjct: 32 VDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCM 91
Query: 433 SLLDEEKDWRPAITIKQILLGIQDL 507
+L + W PA +++ L I L
Sbjct: 92 DIL--KTHWSPAWSLQSACLAIISL 114
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 54.8 bits (126), Expect = 1e-08
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 438
N++ W I G TP+EGG Y +IF DYP PP + P + +CLS
Sbjct: 33 NILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSF 90
Query: 439 LD-EEKDWRPAITIKQILLGI 498
D K W P+ + IL+G+
Sbjct: 91 SDFHPKSWNPSWMVSTILVGL 111
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 259 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLS 435
N+ + G TP+ GG++K+ + +YP P F +FHPN+ SG+VCL
Sbjct: 28 NMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLD 87
Query: 436 LLDEEKDWRP 465
++++ W P
Sbjct: 88 VINQ--TWSP 95
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 32.7 bits (71), Expect = 0.049
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 LNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 432
+ L W I G + E +Y L++ +YP +PP F + P V +G V
Sbjct: 36 ITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNP 95
Query: 433 SLLDEEKDWRPAITIKQILLGIQ 501
+D + W+ +++ +LL ++
Sbjct: 96 HKIDCLRHWKREYSMETVLLDLK 118
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 380 NLHFGGLDG*SSLKIIRSLYSPPSHGVPFLPGIAHSQV 267
N F G+ L + S SP HG P +PG+ H+ +
Sbjct: 442 NPQFSGVLNLPGLGTMPSFPSPYQHGQPQIPGMLHASL 479
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 3.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 510 WKILNTQQNLLYCDCWTPIFF 448
W N Q Y +CW P+F+
Sbjct: 177 WAFENVQWYFRYINCWWPVFY 197
>SPAC3H8.04 |||chromosome segregation protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 411 SIRYGVLVTA**RKRLASSNHNKANFVGYSRSSNEPNVKDP 533
SI GV+ + L H K NFV YS N NV+ P
Sbjct: 163 SIEIGVISFCRCKPSLVFPPHLKINFVAYSLVGNVDNVQFP 203
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 256 LNLMTWECAIPGKKGTPWEGGLYK 327
L+ TW C++ G+ G +G L+K
Sbjct: 138 LDDQTWNCSVYGRNGIKVDGKLFK 161
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 205 GPSLWFCREAYEESRWLLNLMTWECAI 285
GP+ W + Y E+ WLL +C+I
Sbjct: 1663 GPANWVDIDDYHEADWLLPQQNEKCSI 1689
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 467 AGRQSFSSSSSDKHTVPDGYTLGWNSGGSNL 375
A +QS+ + SSD ++P L +NS G +
Sbjct: 249 ASQQSYINHSSDGASLPQSSFLNFNSSGKRV 279
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,676,082
Number of Sequences: 5004
Number of extensions: 55504
Number of successful extensions: 135
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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