Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0978
(481 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 124 6e-29
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 124 6e-29
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 124 6e-29
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 124 6e-29
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 124 6e-29
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 28 5.8
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 28 5.8
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 124 bits (299), Expect = 6e-29
Identities = 62/78 (79%), Positives = 64/78 (82%)
Frame = +3
Query: 204 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 383
K + E L + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 384 NGHIGLGVKCSKEVATAI 437
NGHIGLGVKCSKEVATAI
Sbjct: 117 NGHIGLGVKCSKEVATAI 134
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDSRSL---ISSSARP*MMRFLRSC 315
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK+ + + SS + +++ +
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMP-- 94
Query: 316 LYRNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFRGAIILAKLSVLPV 480
+ + + I + V +++ RGAIILAKLSV+PV
Sbjct: 95 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLSVVPV 148
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 124 bits (299), Expect = 6e-29
Identities = 62/78 (79%), Positives = 64/78 (82%)
Frame = +3
Query: 204 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 383
K + E L + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 384 NGHIGLGVKCSKEVATAI 437
NGHIGLGVKCSKEVATAI
Sbjct: 117 NGHIGLGVKCSKEVATAI 134
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDSRSL---ISSSARP*MMRFLRSC 315
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK+ + + SS + +++ +
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMP-- 94
Query: 316 LYRNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFRGAIILAKLSVLPV 480
+ + + I + V +++ RGAIILAKLSV+PV
Sbjct: 95 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLSVVPV 148
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 124 bits (299), Expect = 6e-29
Identities = 62/78 (79%), Positives = 64/78 (82%)
Frame = +3
Query: 204 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 383
K + E L + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 384 NGHIGLGVKCSKEVATAI 437
NGHIGLGVKCSKEVATAI
Sbjct: 117 NGHIGLGVKCSKEVATAI 134
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDSRSL---ISSSARP*MMRFLRSC 315
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK+ + + SS + +++ +
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMP-- 94
Query: 316 LYRNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFRGAIILAKLSVLPV 480
+ + + I + V +++ RGAIILAKLSV+PV
Sbjct: 95 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLSVVPV 148
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 124 bits (299), Expect = 6e-29
Identities = 62/78 (79%), Positives = 64/78 (82%)
Frame = +3
Query: 204 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 383
K + E L + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 384 NGHIGLGVKCSKEVATAI 437
NGHIGLGVKCSKEVATAI
Sbjct: 117 NGHIGLGVKCSKEVATAI 134
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDSRSL---ISSSARP*MMRFLRSC 315
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK+ + + SS + +++ +
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMP-- 94
Query: 316 LYRNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFRGAIILAKLSVLPV 480
+ + + I + V +++ RGAIILAKLSV+PV
Sbjct: 95 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLSVVPV 148
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 124 bits (299), Expect = 6e-29
Identities = 62/78 (79%), Positives = 64/78 (82%)
Frame = +3
Query: 204 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 383
K + E L + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 384 NGHIGLGVKCSKEVATAI 437
NGHIGLGVKCSKEVATAI
Sbjct: 117 NGHIGLGVKCSKEVATAI 134
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDSRSL---ISSSARP*MMRFLRSC 315
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK+ + + SS + +++ +
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMP-- 94
Query: 316 LYRNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFRGAIILAKLSVLPV 480
+ + + I + V +++ RGAIILAKLSV+PV
Sbjct: 95 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLSVVPV 148
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 151 LPCRAHDHGRDXDRVHEDRHGLYLHRVIRXRREN-RHVHRLEQRPPLLN 8
L C H D R+H + GL + V+ REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 151 LPCRAHDHGRDXDRVHEDRHGLYLHRVIRXRREN-RHVHRLEQRPPLLN 8
L C H D R+H + GL + V+ REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,012,097
Number of Sequences: 53049
Number of extensions: 406700
Number of successful extensions: 1805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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