Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0977
         (263 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    19   9.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   9.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   9.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    19   9.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 226  AFAVNLVPPLPFLSLLMKCFDDLQLDLA 143
            +F  NL+P   F+ +   C  D+QL  A
Sbjct: 919  SFYWNLLPIAVFILVCATCSSDIQLFFA 946



 Score = 19.0 bits (37), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 256 FAMPPL*FLQAF 221
           F  PPL FLQ F
Sbjct: 434 FVPPPLMFLQDF 445


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 226  AFAVNLVPPLPFLSLLMKCFDDLQLDLA 143
            +F  NL+P   F+ +   C  D+QL  A
Sbjct: 919  SFYWNLLPIAVFILVCATCSSDIQLFFA 946



 Score = 19.0 bits (37), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 256 FAMPPL*FLQAF 221
           F  PPL FLQ F
Sbjct: 434 FVPPPLMFLQDF 445


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -1

Query: 260 CFCNASSVVFAGFCCKFSTXIAIFKSFNEMF 168
           C   A SVV    C        +   FNE+F
Sbjct: 566 CATKAQSVVLGRICTLHHHLSKLVTRFNEIF 596


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 20  YLVILVKKTMRNLRKRKI 73
           YL+ + K T++   K+KI
Sbjct: 241 YLINVFKTTLQEREKKKI 258


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 121 ANESSSSMPDPT 156
           AN +S S+P+PT
Sbjct: 392 ANMNSYSVPEPT 403


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 256 FAMPPL*FLQAF 221
           F  PPL FLQ F
Sbjct: 201 FVPPPLMFLQDF 212


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 32  LVKKTMRNLRKRKIKTRKNVVET 100
           +V  T+RNL K      +NV E+
Sbjct: 202 IVSDTLRNLDKIVTNGFRNVAES 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.301    0.121    0.330 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,042
Number of Sequences: 336
Number of extensions: 880
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4271720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.1 bits)