Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0977
         (263 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83246-1|CAB05842.2|  312|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z70208-12|CAA94137.2|  209|Caenorhabditis elegans Hypothetical p...    26   3.2  
U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p...    26   4.2  
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr...    26   4.2  
U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AL032635-4|CAA21601.1|  140|Caenorhabditis elegans Hypothetical ...    26   4.2  
Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical pr...    25   5.6  
U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical p...    25   5.6  
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p...    25   5.6  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    25   9.8  

>Z83246-1|CAB05842.2|  312|Caenorhabditis elegans Hypothetical
           protein ZK795.1 protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 139 SMPDPTEGHQNISLKDLKMAMXVLNLQQKPAKTTEEALQ 255
           +M D T G+Q  ++ DLKM     +   KP K  +E ++
Sbjct: 121 AMEDVTIGYQRPAILDLKMGQVTYDPIAKPEKIEKERIK 159


>Z70208-12|CAA94137.2|  209|Caenorhabditis elegans Hypothetical
           protein F54B11.4 protein.
          Length = 209

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 115 STANESSSSMPDPTEGHQNISLKDLKMAMXVLNLQQK 225
           S +NE SS +P  +   Q +  + L+ +  +L+LQQ+
Sbjct: 39  SDSNEISSFLPSYSPFQQQLQFQQLQQSRNLLSLQQQ 75


>U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical
           protein C52E12.1 protein.
          Length = 925

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 91  GGDGDHGISTANESSSSMPDPTEGHQN 171
           GG+   G STAN ++S  P+P   +Q+
Sbjct: 28  GGNRGRGGSTANNNASRRPNPARQNQS 54


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 106 HGISTANESSSSMPDPTEGHQNISLKDLKMAMXVLNLQQK-PAKT 237
           H I+ ++ SS   PD +    N+   DL+M    + ++Q  P K+
Sbjct: 493 HAINISSTSSKEQPDLSVSLPNVLSDDLQMVCKEIEIEQNDPPKS 537


>Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical
           protein F23D12.10 protein.
          Length = 552

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 163 HQNISLKDLKMAMXVLNLQQKPAK 234
           H+N ++KD+K+ +   NL+QK  K
Sbjct: 372 HENKAIKDVKVPINANNLKQKNVK 395


>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
            protein AH6.1 protein.
          Length = 1137

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 115  STANESSSSMPDPTEGHQNISLKDLKMA 198
            S+     SS+ DP +GHQ   +  LK+A
Sbjct: 1109 SSHGSRPSSVYDPLQGHQKFKMDTLKVA 1136


>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical protein
            AH6.1 protein.
          Length = 1137

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 115  STANESSSSMPDPTEGHQNISLKDLKMA 198
            S+     SS+ DP +GHQ   +  LK+A
Sbjct: 1109 SSHGSRPSSVYDPLQGHQKFKMDTLKVA 1136


>U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical
           protein T20B12.5 protein.
          Length = 131

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 115 IYHDLRLHHVFSCFYFSFSEVSHRFLY 35
           IY +LR+HHVF         ++H  L+
Sbjct: 32  IYQNLRIHHVFQIREILLLHMAHEVLH 58


>AL032635-4|CAA21601.1|  140|Caenorhabditis elegans Hypothetical
           protein Y51A2A.6 protein.
          Length = 140

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 91  GGDGDHGISTANESSSSMPDPTEGH 165
           GG  +HG S+A+ SSSS  +  + H
Sbjct: 26  GGGKNHGFSSASSSSSSSSEEGKKH 50


>Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical
           protein R07E3.6 protein.
          Length = 927

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 15/75 (20%), Positives = 30/75 (40%)
 Frame = +1

Query: 1   EETKTGVSCDFSKENDEKPQXXXXXXXXXRGGDGDHGISTANESSSSMPDPTEGHQNISL 180
           ++ KT    DF+ +++   Q             G+H  +T  ES +            S 
Sbjct: 185 DKKKTAEKVDFTTDDNNVSQEADAKPDSTHENGGEHVSTTPEESITENTTAEVPASTAST 244

Query: 181 KDLKMAMXVLNLQQK 225
           KD K+++ + +  +K
Sbjct: 245 KDTKLSVKIRSEDEK 259


>U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical
           protein F19F10.11b protein.
          Length = 868

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 100 GDHGISTANESSSSMPDPTEGHQNISLKDLKMA 198
           G+   ST+N S   +P P++  + IS  DL M+
Sbjct: 54  GNSTASTSNFSREELPGPSDVVRTISKNDLMMS 86


>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
           protein F19F10.11a protein.
          Length = 1121

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 100 GDHGISTANESSSSMPDPTEGHQNISLKDLKMA 198
           G+   ST+N S   +P P++  + IS  DL M+
Sbjct: 54  GNSTASTSNFSREELPGPSDVVRTISKNDLMMS 86


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 91   GGDGDHGISTANESSSSMPDPTEGHQNISLKDLKMAMXVLNLQQK 225
            G D D G    ++SSSS+   TE     S K  K A   +N  Q+
Sbjct: 3726 GSDSDSGSEVRSDSSSSLGGSTESLN--SSKKGKRARRAMNKAQR 3768


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.301    0.121    0.330 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,156,578
Number of Sequences: 27780
Number of extensions: 86074
Number of successful extensions: 136
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)