Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0977
         (263 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   1.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   1.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   2.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   3.4  
AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly pro...    21   3.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      19   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   7.8  

>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 35  VKKTMRNLRKRKIKTRKNVVETEIM 109
           +KKT++NL  RK+ ++KN    E++
Sbjct: 6   LKKTIKNL--RKVCSKKNDTPKELL 28


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 38  KKTMRNLRKRKIKTRKNVVETEIM 109
           KKT++NL  RK+ ++KN    E++
Sbjct: 33  KKTIKNL--RKVCSKKNDTPKELL 54


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +1

Query: 124 NESSSSMPDPTEGHQNISLKDLKMAMXVLNLQQKPAKTTEEAL 252
           N S  ++P P E  +   L+++ +     +  +KP    + AL
Sbjct: 185 NVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHAL 227


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 211  NLQQKPAKTTEE 246
            +L QKP  TTEE
Sbjct: 1750 DLSQKPVSTTEE 1761


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 225 ACKNYRGGIAK 257
           AC+N RGG+ +
Sbjct: 14  ACQNIRGGVVR 24


>AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly
           protein MRJP4 protein.
          Length = 27

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 225 ACKNYRGGIAK 257
           AC+N RGG+ +
Sbjct: 14  ACQNIRGGVVR 24


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 59  RKRKIKTRKNVVETE 103
           RKRK  T +N  ETE
Sbjct: 216 RKRKSSTIENESETE 230


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 11  KRAYLVILVKKTMRNLRKRKIKTRKNVV 94
           +RAY    ++  +R+++  K+ TR+  V
Sbjct: 588 RRAYTEEELQAALRDIQSGKLGTRRAAV 615


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.301    0.121    0.330 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,687
Number of Sequences: 438
Number of extensions: 870
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.1 bits)