Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0975
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.3  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   4.3  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   4.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.6  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.6  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   7.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +3

Query: 117  LLGTGEDHHGHQQTRXAGPRSAEARKIGQENRNTP 221
            ++ +G+ H G  Q+  A P++ + + + +  +N P
Sbjct: 923  IVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQNKP 957


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 471 CSPVCSPAFCCRLLYGR 421
           C  +C+P   CRL Y R
Sbjct: 63  CIKICAPGCVCRLGYLR 79


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 471 CSPVCSPAFCCRLLYGR 421
           C  +C+P   CRL Y R
Sbjct: 63  CIKICAPGCVCRLGYLR 79


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = +1

Query: 16  DRCHRWETFFRSTSADREIQRTLMELLNQMDGFDSLGQVKIIMATNRPXTLD 171
           +R HR     R    DR  +   M+ +++MD  D++ ++  +   +R   +D
Sbjct: 370 NRMHRMNRVNRVNRMDRMDRIDRMDRMDRMDTMDTMDRIDRMDRMDRIDRID 421


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 383 GPDGEESCLRADV 345
           G DG+ES  RAD+
Sbjct: 202 GNDGDESSCRADI 214


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 6   SWTRSMPSVGDVFPKH 53
           +WTR   ++ D+ PKH
Sbjct: 239 TWTRVFNTLVDLVPKH 254


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 377 DGEESCLRADVAQVRAVESI*KLHDRLVVHLAVLGDRRR 261
           DGE SC R    + +      +LH+    HL     RRR
Sbjct: 248 DGERSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRR 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,512
Number of Sequences: 438
Number of extensions: 3135
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)