Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0969
         (453 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0435 + 3092910-3093392,3093938-3094196,3094636-3094979           35   0.027
01_06_1485 + 37703696-37703815,37703970-37704044,37704598-377046...    31   0.43 
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526...    28   4.0  
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255...    28   4.0  
07_03_1420 + 26448009-26448085,26448302-26448394,26448634-264487...    27   5.3  
03_05_0839 + 28097780-28097878,28098573-28098782,28099196-28099372     27   7.1  
03_03_0157 + 14947935-14948210,14948448-14948518,14948891-149490...    27   7.1  
03_02_0715 + 10621789-10623243,10624074-10625018                       27   7.1  
02_01_0221 + 1447305-1447435,1448693-1449140                           27   7.1  
01_05_0167 + 18849791-18849973,18850081-18850250,18850341-188504...    27   7.1  

>06_01_0435 + 3092910-3093392,3093938-3094196,3094636-3094979
          Length = 361

 Score = 35.1 bits (77), Expect = 0.027
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +2

Query: 104 QNKTQRDLAREEICKRIIPHWNDLNMEDKKQIREYKKKQWNNV 232
           Q KT    A  E+  R I HW DLN+E+KK+ R+  K ++N +
Sbjct: 291 QRKTGITRAELELKTRNI-HWGDLNLEEKKRTRKELKAEYNEL 332


>01_06_1485 +
           37703696-37703815,37703970-37704044,37704598-37704699,
           37704792-37704845,37705030-37705122,37705215-37705307,
           37707150-37707254,37707356-37707454,37707558-37707899
          Length = 360

 Score = 31.1 bits (67), Expect = 0.43
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +1

Query: 319 LLPVLQNSKSRERXMPSGXHEDSYEDNETIEIEVRPQTEDEDDED 453
           ++ ++Q +++  +   +G   D+  D E  E E RP+  +E++ED
Sbjct: 294 IMKIVQEARTMPKSSRTGYWSDAGSDEEEKEEEERPEENEEEEED 338


>11_01_0650 -
           5265106-5265305,5265972-5266049,5266391-5266544,
           5266635-5266701,5266723-5266796,5266910-5267794
          Length = 485

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 328 VLQNSKSRERXMPSGXHEDSYEDNETIEIEVRPQTEDEDDED 453
           +  + +  +        EDSYED++  + E     ED+DDED
Sbjct: 428 IFDDDEDEDEDRDGDDDEDSYEDDDDKD-EDEDSYEDDDDED 468


>06_01_0356 +
           2557127-2557193,2557272-2557315,2557433-2557528,
           2559259-2559351,2559450-2559540,2559617-2559678,
           2559754-2559938,2560022-2560199,2560293-2560336,
           2560440-2560635,2560728-2560745,2560955-2561005
          Length = 374

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 379 EDSYEDNETIEIEVRPQTEDEDDED 453
           ED  +D+E  E E   + EDEDDE+
Sbjct: 320 EDDEDDDEDEEEEEEDEDEDEDDEE 344


>07_03_1420 +
           26448009-26448085,26448302-26448394,26448634-26448727,
           26448822-26448859,26448999-26449090,26449179-26449258,
           26449332-26449388,26449420-26449449,26449505-26449597,
           26449766-26449840,26449888-26449959
          Length = 266

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +2

Query: 35  EIEDLISEVEKN-PCLWNVGCSNYQNKTQRDLA-REEICKRIIPHWNDLNMEDKKQIREY 208
           EI+D+   ++     +  +  SN Q+K   DL  +   CKR+I  ++ +  ED+K+    
Sbjct: 17  EIQDIFRALQNGFQKMDKIKDSNRQSKQLEDLTGKMRECKRLIKEFDRILKEDEKKNSAD 76

Query: 209 KKKQWNN 229
             KQ N+
Sbjct: 77  VNKQLND 83


>03_05_0839 + 28097780-28097878,28098573-28098782,28099196-28099372
          Length = 161

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 98  NYQNKTQRDLAREE-ICKRIIPHWNDLNMEDKKQIREYK 211
           N+ NK  +DL+ EE I  R    +N + +E  K+IR Y+
Sbjct: 83  NFDNKVTKDLSEEEVITLRKEKRFNRVAIERLKEIRCYR 121


>03_03_0157 +
           14947935-14948210,14948448-14948518,14948891-14949004,
           14949160-14949242,14949329-14949390,14949495-14949614,
           14950398-14950493,14950613-14950696
          Length = 301

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 86  VGCSNYQNKTQRDLARE-EICKRIIPHWNDLNMEDKKQIREYKKKQWNNVRDGYR 247
           +GCS+  +K   D  RE E+   II   N     DK+ ++EY   ++N   D YR
Sbjct: 64  MGCSSCYSKRFTD--REMEVGVLIIARENGPVCMDKESVKEYILCEYNRDADSYR 116


>03_02_0715 + 10621789-10623243,10624074-10625018
          Length = 799

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 331 LQNSKSRERXMPSGXHEDSYEDNETIEIEVRPQTEDEDDED 453
           L+ S  R          D  E+ E  +++  P+ EDE++ED
Sbjct: 164 LERSNRRRYEEDMDFDPDMDEEEEEEDVDFDPEVEDEEEED 204


>02_01_0221 + 1447305-1447435,1448693-1449140
          Length = 192

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +2

Query: 77  LWNVGCSNYQNKTQRDLAREEICKRIIPHWNDLNMEDKKQIREYKKKQWNNVRDGYRKY* 256
           ++NV  S ++N  QRDL        +I  W D  M+   QIR +     N   + +R   
Sbjct: 49  VFNVAVSVHKNIQQRDLEVGRNLGNMILRWLD-RMKPSAQIRPHPPGPPNGSSEQFRHLS 107

Query: 257 TETKIRPCQRRNSFT 301
           + +K    Q+  S T
Sbjct: 108 STSKSTGAQKPTSKT 122


>01_05_0167 +
           18849791-18849973,18850081-18850250,18850341-18850413,
           18850729-18850839,18850947-18850992,18851085-18851148,
           18851810-18851912,18851999-18852094,18852186-18852215,
           18852434-18852533,18852761-18852845,18852965-18853088
          Length = 394

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 352 ERXMPSGXHEDSYEDNETIEIEVRPQTEDEDDED 453
           +R + S   +D  E+ E  E E+  + ++EDD+D
Sbjct: 55  DRQVSSSNDDDDSEEEEQEEREMDEEEDEEDDDD 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,096,363
Number of Sequences: 37544
Number of extensions: 212088
Number of successful extensions: 772
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)