Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0968
         (533 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   2.8  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   2.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   6.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.5  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 39  SEKLRELRERSQKRKKLLAQTLGVSSVSEL 128
           +E   ELR+  +    LLAQTLG +S + L
Sbjct: 129 AEHREELRKEKELFNALLAQTLGGTSGARL 158


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 36  MSEKLRELRERSQKRKK 86
           M EKLRE RE +Q+R++
Sbjct: 66  MEEKLREQREDAQRREE 82


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 323 QRPQNYIRDVGLADRFEEYPKLRELIKLKDDLIAETATPPMYLKCDLK 466
           +  Q + R++  AD      K RELI+  +DLI +    P  L+   K
Sbjct: 147 EEDQRHYRELKAADEI----KRRELIQKAEDLIQKDKVGPRVLESAAK 190


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 138 AHVLIRSHSRHLMSVLEAFFVFEISRVVLLISH 40
           AHVL+   +R L + +       + R    ISH
Sbjct: 770 AHVLVLKENRQLANRVHRLLAMRVVRAYKTISH 802


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,657
Number of Sequences: 2352
Number of extensions: 10308
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)