Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0968
         (533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069354-1|AAL39499.1|  397|Drosophila melanogaster LD06016p pro...   154   6e-38
AE014134-1456|AAF52637.1|  397|Drosophila melanogaster CG7818-PA...   154   6e-38
AY075515-1|AAL68323.1|  670|Drosophila melanogaster RE65495p pro...    31   0.75 
AF091050-1|AAC71019.1|  672|Drosophila melanogaster Partner of N...    31   0.75 
AE014298-650|AAF45964.1|  670|Drosophila melanogaster CG3346-PA ...    31   0.75 
AY122156-1|AAM52668.1|  376|Drosophila melanogaster LD10135p pro...    29   3.0  
AE014134-2274|AAF53239.1|  376|Drosophila melanogaster CG9933-PA...    29   3.0  
X70799-1|CAA50069.1|  843|Drosophila melanogaster serin/threonin...    29   4.0  
BT015255-1|AAT94484.1| 1100|Drosophila melanogaster LP07621p pro...    29   4.0  
AE014298-2626|AAF48777.3|  908|Drosophila melanogaster CG7826-PA...    29   4.0  
BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p pro...    28   7.0  
AF334032-1|AAK09434.1| 1549|Drosophila melanogaster no-mechanore...    28   7.0  
AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-P...    28   7.0  
AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-P...    28   7.0  

>AY069354-1|AAL39499.1|  397|Drosophila melanogaster LD06016p
           protein.
          Length = 397

 Score =  154 bits (374), Expect = 6e-38
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +2

Query: 254 SFLKGTQSSNPHNDYCQHFVDTGQRPQNYIRDVGLADRFEEYPKLRELIKLKDDLIAETA 433
           +FLKGTQSSNPHNDYCQHFVDTGQRPQN+IRDVGLADRFEEYPKLRELIKLKD LI +TA
Sbjct: 77  TFLKGTQSSNPHNDYCQHFVDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDKLIQDTA 136

Query: 434 TPPMYLKCDLKTFDLKDMANKFDV 505
           + PMYLK DLK+ D+K +  KFDV
Sbjct: 137 SAPMYLKADLKSLDVKTLGAKFDV 160



 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = +3

Query: 36  MSEKLRELRERSQKRKKLLAQTLGVSSVSELRHALGSALDVPVKKQAVSGSGGE---GDK 206
           MS+ L+  +ERS+KR+ LLAQTLG+SSV +L+ ALG+A D+   +Q  SG   E   G  
Sbjct: 1   MSDVLKSSQERSRKRRLLLAQTLGLSSVDDLKKALGNAEDINSSRQLNSGGQREEEDGGA 60

Query: 207 PTSKDQPDELVYTDSSHF 260
            +SK  P+E++Y DSS F
Sbjct: 61  SSSKKTPNEIIYRDSSTF 78


>AE014134-1456|AAF52637.1|  397|Drosophila melanogaster CG7818-PA
           protein.
          Length = 397

 Score =  154 bits (374), Expect = 6e-38
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +2

Query: 254 SFLKGTQSSNPHNDYCQHFVDTGQRPQNYIRDVGLADRFEEYPKLRELIKLKDDLIAETA 433
           +FLKGTQSSNPHNDYCQHFVDTGQRPQN+IRDVGLADRFEEYPKLRELIKLKD LI +TA
Sbjct: 77  TFLKGTQSSNPHNDYCQHFVDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDKLIQDTA 136

Query: 434 TPPMYLKCDLKTFDLKDMANKFDV 505
           + PMYLK DLK+ D+K +  KFDV
Sbjct: 137 SAPMYLKADLKSLDVKTLGAKFDV 160



 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = +3

Query: 36  MSEKLRELRERSQKRKKLLAQTLGVSSVSELRHALGSALDVPVKKQAVSGSGGE---GDK 206
           MS+ L+  +ERS+KR+ LLAQTLG+SSV +L+ ALG+A D+   +Q  SG   E   G  
Sbjct: 1   MSDVLKSSQERSRKRRLLLAQTLGLSSVDDLKKALGNAEDINSSRQLNSGGQREEEDGGA 60

Query: 207 PTSKDQPDELVYTDSSHF 260
            +SK  P+E++Y DSS F
Sbjct: 61  SSSKKTPNEIIYRDSSTF 78


>AY075515-1|AAL68323.1|  670|Drosophila melanogaster RE65495p
           protein.
          Length = 670

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 33  KMSEKLRE-LRERSQKRKKLLAQTLGVSSVSELRHALGSALDVPVKKQAVSGSGGEGDKP 209
           K+ EKL E LRE+ Q+R K L +        E    L   L+   +K+   G      + 
Sbjct: 427 KLQEKLHEQLREKLQERAKHLEK-----EKLEEEELLERQLEEEREKEPTDGDVAYASES 481

Query: 210 TSKDQPDELVYTDSSHF*RA 269
            S D+PD+L +   + F RA
Sbjct: 482 ESDDEPDDLDFKAPARFVRA 501


>AF091050-1|AAC71019.1|  672|Drosophila melanogaster Partner of Numb
           protein.
          Length = 672

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 33  KMSEKLRE-LRERSQKRKKLLAQTLGVSSVSELRHALGSALDVPVKKQAVSGSGGEGDKP 209
           K+ EKL E LRE+ Q+R K L +        E    L   L+   +K+   G      + 
Sbjct: 429 KLQEKLHEQLREKLQERAKHLEK-----EKLEEEELLERQLEEEREKEPTDGDVAYASES 483

Query: 210 TSKDQPDELVYTDSSHF*RA 269
            S D+PD+L +   + F RA
Sbjct: 484 ESDDEPDDLDFKAPARFVRA 503


>AE014298-650|AAF45964.1|  670|Drosophila melanogaster CG3346-PA
           protein.
          Length = 670

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 33  KMSEKLRE-LRERSQKRKKLLAQTLGVSSVSELRHALGSALDVPVKKQAVSGSGGEGDKP 209
           K+ EKL E LRE+ Q+R K L +        E    L   L+   +K+   G      + 
Sbjct: 427 KLQEKLHEQLREKLQERAKHLEK-----EKLEEEELLERQLEEEREKEPTDGDVAYASES 481

Query: 210 TSKDQPDELVYTDSSHF*RA 269
            S D+PD+L +   + F RA
Sbjct: 482 ESDDEPDDLDFKAPARFVRA 501


>AY122156-1|AAM52668.1|  376|Drosophila melanogaster LD10135p
           protein.
          Length = 376

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 141 GSALDVPVKKQAVSGSGGEGDKPTSKDQPDE 233
           G+      K +A +GS GEGD P S   P E
Sbjct: 62  GAGKQTDHKTEAAAGSCGEGDSPQSSQSPPE 92


>AE014134-2274|AAF53239.1|  376|Drosophila melanogaster CG9933-PA
           protein.
          Length = 376

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 141 GSALDVPVKKQAVSGSGGEGDKPTSKDQPDE 233
           G+      K +A +GS GEGD P S   P E
Sbjct: 62  GAGKQTDHKTEAAAGSCGEGDSPQSSQSPPE 92


>X70799-1|CAA50069.1|  843|Drosophila melanogaster
           serin/threonin-kinase protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 102 LGVSSVSELRHALGSALDVPVKKQAVSGSGGEGDKPTSKD 221
           +GV  V + RH  G A  V + +   SGS G     +S D
Sbjct: 784 VGVGVVGQRRHITGPAAQVGISQSVGSGSSGSATGASSSD 823


>BT015255-1|AAT94484.1| 1100|Drosophila melanogaster LP07621p protein.
          Length = 1100

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 102  LGVSSVSELRHALGSALDVPVKKQAVSGSGGEGDKPTSKD 221
            +GV  V + RH  G A  V + +   SGS G     +S D
Sbjct: 1041 VGVGVVGQRRHITGPAAQVGISQSVGSGSSGSATGASSSD 1080


>AE014298-2626|AAF48777.3|  908|Drosophila melanogaster CG7826-PA,
           isoform A protein.
          Length = 908

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 102 LGVSSVSELRHALGSALDVPVKKQAVSGSGGEGDKPTSKD 221
           +GV  V + RH  G A  V + +   SGS G     +S D
Sbjct: 849 VGVGVVGQRRHITGPAAQVGISQSVGSGSSGSATGASSSD 888


>BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p protein.
          Length = 1549

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 219  DQPDELVYTDSSHF*RARSHQILTMTIVS 305
            + P E +YTD S F R+RS + LTM   S
Sbjct: 1515 EDPSEPIYTDPSLFERSRSLRSLTMVAES 1543


>AF334032-1|AAK09434.1| 1549|Drosophila melanogaster
            no-mechanoreceptor potential Ashort isoform protein.
          Length = 1549

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 219  DQPDELVYTDSSHF*RARSHQILTMTIVS 305
            + P E +YTD S F R+RS + LTM   S
Sbjct: 1515 EDPSEPIYTDPSLFERSRSLRSLTMVAES 1543


>AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-PD,
            isoform D protein.
          Length = 1549

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 219  DQPDELVYTDSSHF*RARSHQILTMTIVS 305
            + P E +YTD S F R+RS + LTM   S
Sbjct: 1515 EDPSEPIYTDPSLFERSRSLRSLTMVAES 1543


>AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-PC,
            isoform C protein.
          Length = 1549

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 219  DQPDELVYTDSSHF*RARSHQILTMTIVS 305
            + P E +YTD S F R+RS + LTM   S
Sbjct: 1515 EDPSEPIYTDPSLFERSRSLRSLTMVAES 1543


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,458,325
Number of Sequences: 53049
Number of extensions: 448106
Number of successful extensions: 1639
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)