Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0967
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.77 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.77 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +2

Query: 104 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM--KDKTEWEQKVPRPRSNM 277
           K+P++A+ML++   R ++ +E        I +  G  W ++  +++ ++ +   R R   
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLH 539

Query: 278 QKT*NLTMPMAVVAKGAKRRLKNE 349
            +        A   +G KR+ K +
Sbjct: 540 MQLYPDWSSRANATRGKKRKRKQD 563


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +2

Query: 104 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM--KDKTEWEQKVPRPRSNM 277
           K+P++A+ML++   R ++ +E        I +  G  W ++  +++ ++ +   R R   
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLH 431

Query: 278 QKT*NLTMPMAVVAKGAKRRLKNE 349
            +        A   +G KR+ K +
Sbjct: 432 MQLYPDWSSRANATRGKKRKRKQD 455


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 76  PDGKNFEIIFELVHN 32
           P G NFEI FE  +N
Sbjct: 319 PAGSNFEIGFENYYN 333


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 340  EPSFRPLRHHRHWHCK 293
            +PS+RP     HW  K
Sbjct: 1171 KPSYRPPSTTNHWQTK 1186


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 551 KSKHFIQTLESQSRLLCNKL 492
           ++KH++Q  + + R LC  L
Sbjct: 568 QAKHYVQYDQGEDRWLCTLL 587


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 551 KSKHFIQTLESQSRLLCNKL 492
           ++KH++Q  + + R LC  L
Sbjct: 801 QAKHYVQYDQGEDRWLCTLL 820


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 551 KSKHFIQTLESQSRLLCNKL 492
           ++KH++Q  + + R LC  L
Sbjct: 801 QAKHYVQYDQGEDRWLCTLL 820


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,383
Number of Sequences: 336
Number of extensions: 2624
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)