Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0955
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 120 4e-26
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 117 3e-25
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 113 4e-24
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 111 2e-23
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 109 8e-23
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 107 2e-22
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 102 7e-21
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 98 2e-19
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 97 4e-19
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 97 5e-19
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 97 5e-19
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 94 2e-18
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 93 6e-18
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 89 7e-17
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 88 2e-16
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 81 3e-14
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 80 6e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 74 4e-12
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 73 7e-12
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 72 1e-11
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 69 1e-10
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 60 5e-08
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 55 1e-06
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 55 2e-06
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 54 3e-06
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 52 2e-05
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 49 1e-04
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 48 2e-04
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 47 4e-04
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 44 0.005
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 42 0.014
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 41 0.025
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 40 0.075
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.23
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.40
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 36 0.93
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 36 0.93
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.2
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.2
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 2.8
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 3.7
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 4.9
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 6.5
UniRef50_UPI0000383042 Cluster: hypothetical protein Magn0300385... 33 6.5
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 33 8.6
UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber... 33 8.6
UniRef50_Q3WJC1 Cluster: High-affinity nickel-transporter precur... 33 8.6
UniRef50_A7IHM0 Cluster: Bilirubin oxidase precursor; n=1; Xanth... 33 8.6
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 33 8.6
UniRef50_Q555C4 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 120 bits (288), Expect = 4e-26
Identities = 55/87 (63%), Positives = 58/87 (66%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 434
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 435 XXXXXXXXXXXXXXXXQARGHIIEKFP 515
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVP 148
Score = 96.3 bits (229), Expect = 6e-19
Identities = 43/61 (70%), Positives = 53/61 (86%)
Frame = +2
Query: 506 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRK 685
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAG GKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 686 G 688
G
Sbjct: 206 G 206
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +1
Query: 70 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 250 HQ 255
HQ
Sbjct: 60 HQ 61
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 117 bits (281), Expect = 3e-25
Identities = 54/89 (60%), Positives = 59/89 (66%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 434
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 435 XXXXXXXXXXXXXXXXQARGHIIEKFPSF 521
Q++GH+I+ F
Sbjct: 125 YALVSAIAASGVPALVQSKGHVIDGVSEF 153
Score = 93.9 bits (223), Expect = 3e-18
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +1
Query: 64 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 243
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 244 AGHQ 255
AGHQ
Sbjct: 61 AGHQ 64
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 113 bits (272), Expect = 4e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 407
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 179 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 97 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQ
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQ 178
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 111 bits (267), Expect = 2e-23
Identities = 50/60 (83%), Positives = 57/60 (95%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+ E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAG GKMRNRRR+ RKG
Sbjct: 12 VSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKG 71
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 109 bits (261), Expect = 8e-23
Identities = 50/87 (57%), Positives = 53/87 (60%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 434
TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 38 TSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQKR 97
Query: 435 XXXXXXXXXXXXXXXXQARGHIIEKFP 515
ARGH + P
Sbjct: 98 FATASALAASGSPALLMARGHNVSTVP 124
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 509 IPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQ 679
+PE+PLV++ I KT AV L+ + A +D K S++LRAG GK+R RR Q
Sbjct: 123 VPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQ 182
Query: 680 RKG 688
R+G
Sbjct: 183 RRG 185
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 107 bits (258), Expect = 2e-22
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 407
TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 61 TSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +1
Query: 79 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQ
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQ 60
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 506 KIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRI 676
++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAG GK+R RR
Sbjct: 145 EVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHR 204
Query: 677 QRKG 688
QR+G
Sbjct: 205 QRRG 208
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 102 bits (245), Expect = 7e-21
Identities = 45/55 (81%), Positives = 46/55 (83%)
Frame = +3
Query: 240 GGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 404
G TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +1
Query: 70 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 249
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 250 HQ 255
++
Sbjct: 60 YE 61
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRR 670
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRK 200
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 407
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG GKMRNRR + R+G
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +1
Query: 79 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 249
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/86 (54%), Positives = 48/86 (55%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 437
SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 64 SAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRH 123
Query: 438 XXXXXXXXXXXXXXXQARGHIIEKFP 515
ARGH I + P
Sbjct: 124 AAATAVAATGIVPLVLARGHRISQVP 149
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 85 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQ 62
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +2
Query: 506 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRK 685
++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RK
Sbjct: 147 QVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRK 206
Query: 686 G 688
G
Sbjct: 207 G 207
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/100 (44%), Positives = 54/100 (54%)
Frame = +3
Query: 216 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 395
+A + G+ TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGYQ-TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 396 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKFP 515
R WH +RGH +E P
Sbjct: 108 RHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVP 147
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +1
Query: 76 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMR 661
+PELPLV+ D ++ + KT+ AV L + ++ +V ++R + GK R
Sbjct: 146 VPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +3
Query: 216 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 395
+A + + G+ TSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGYQ-TSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 396 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIE 506
RRWH +RGH IE
Sbjct: 108 RRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIE 144
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +1
Query: 82 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+Q
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQ 60
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 515 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK-SQRLRAGXGK 655
E+P+VV D +++INKTK AV L + +++ ++ K + R R G K
Sbjct: 148 EVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKK 195
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/86 (53%), Positives = 49/86 (56%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 437
SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 64 SAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRH 123
Query: 438 XXXXXXXXXXXXXXXQARGHIIEKFP 515
ARGH I P
Sbjct: 124 AVAAAIAATGCPSLVMARGHRINNVP 149
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 70 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 249
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 250 HQ 255
HQ
Sbjct: 61 HQ 62
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGXGKMRNRRRI 676
+PELPLV+++++Q INKT AV F + K + +K + S +R G GKMRNRRR+
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRV 205
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 93.1 bits (221), Expect = 6e-18
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 407
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRR 670
IPE+P V+ D +++I KT+ + L L + I++ ++L++G GKMRNRR
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRNRR 194
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 89.4 bits (212), Expect = 7e-17
Identities = 41/86 (47%), Positives = 47/86 (54%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 437
SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 63 SAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRF 122
Query: 438 XXXXXXXXXXXXXXXQARGHIIEKFP 515
ARGH I+ P
Sbjct: 123 AMCSAIAASSNPSLVLARGHKIDNVP 148
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR QR+G
Sbjct: 147 VPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRG 206
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +1
Query: 88 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQ 61
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 87.8 bits (208), Expect = 2e-16
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 404
SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 60 SAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +2
Query: 518 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
LP++V+D + + KTK AV LR L ++ +V KS+ +R G GKMRNRR QRKG
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKG 203
Score = 40.3 bits (90), Expect = 0.043
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +1
Query: 91 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQ 58
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/96 (43%), Positives = 50/96 (52%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 437
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 438 XXXXXXXXXXXXXXXQARGHIIEKFPSFXWL*PTKS 545
ARGH I P + +KS
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 497 HY*KIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRR 673
H +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG GKMR R+
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKI 202
Query: 674 IQRKG 688
+RKG
Sbjct: 203 KERKG 207
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +1
Query: 79 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQ 61
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +2
Query: 506 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRN 664
++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAG GKMRN
Sbjct: 9 EVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +2
Query: 539 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAG GKMRNRR IQR+G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRG 147
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 192 SRFYVQELEAALLREQGGWSPTSAESWGTGRAVARIPRVRGGG 320
S + + + + E G+ TSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGYQ-TSAESWGTGRARGPMPRVRGGG 73
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 175 DLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
D+VN VH ++ KN QPY VS+ AG+Q
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQ 51
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 437
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 60 SAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKF 119
Query: 438 XXXXXXXXXXXXXXXQARGHII 503
QARGH++
Sbjct: 120 AIASAIAATAVVPLVQARGHVL 141
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 506 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRK 685
++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ GK R +K
Sbjct: 143 EVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKK 202
Query: 686 G 688
G
Sbjct: 203 G 203
Score = 40.3 bits (90), Expect = 0.043
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +1
Query: 76 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 249
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAG 56
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 72.1 bits (169), Expect = 1e-11
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 407
SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 64 SAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+PE+PLVV D I KT +AV L++L A++DI KV S+ +R+G GKMRNRR +QR+G
Sbjct: 150 VPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRG 209
Score = 35.9 bits (79), Expect = 0.93
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 127 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 213
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+PELPLV+ D + + KT A+ L++ A+ D K S + G GKMRNRR I RKG
Sbjct: 10 VPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKG 69
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 515 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRK 685
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG GKMR RR Q K
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPK 196
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/59 (35%), Positives = 39/59 (66%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRK 685
+P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAG GK R RR ++ K
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPK 199
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXX 431
TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 56 TSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKER 114
Query: 432 XXXXXXXXXXXXXXXXXQARGHIIEKFP 515
+ RGH+I+ P
Sbjct: 115 RAALRSALAATAKPEFVKERGHVIDDVP 142
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 85 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 249
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAG 53
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 54.0 bits (124), Expect = 3e-06
Identities = 35/101 (34%), Positives = 42/101 (41%)
Frame = +3
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 437
+A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 59 TAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRY 112
Query: 438 XXXXXXXXXXXXXXXQARGHIIEKFPSFXWL*PTKSRRSTR 560
+ARGH I PS + T + T+
Sbjct: 113 AVASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTK 153
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2
Query: 509 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+P +PLVV + KTK A+ ++ + D+ + S+ +RAG GKMRNRR I RKG
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKG 194
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +1
Query: 85 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 255
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 506 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRR 670
K+P LP+VV ++IN+ K+A L W D+ + + ++RAG GKMR RR
Sbjct: 163 KVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/94 (31%), Positives = 38/94 (40%)
Frame = +3
Query: 237 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 416
+G S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 417 XXXXXXXXXXXXXXXXXXXXXXQARGHIIEKFPS 518
ARGH++EK PS
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPS 166
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/57 (35%), Positives = 37/57 (64%)
Frame = +2
Query: 515 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRK 685
ELP VV+++++ + +TK R + ++D+ + + +R RAG GKMR RR +++K
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKK 192
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 530 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKG
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKG 53
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/74 (39%), Positives = 34/74 (45%)
Frame = +2
Query: 200 LCPRTRGSPTA*ARRLVTNQCRIMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVR 379
L P RG P L ++G+R C SA W VR C+R HV WW +VR
Sbjct: 99 LAPGVRGEPPVRHEPLGA----LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVR 154
Query: 380 PHEALAALAPSRQP 421
E L LAP QP
Sbjct: 155 ADEDLPPLAPQDQP 168
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +2
Query: 521 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRR 670
P+VV D + + T + FL+++ + D+ +V + R+RAG GKMR R+
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRK 196
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 41.9 bits (94), Expect = 0.014
Identities = 16/61 (26%), Positives = 36/61 (59%)
Frame = +2
Query: 506 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRK 685
++ ++P V+ D+++ + TK+ + L DI++ K +++++G GK+R R+ K
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPK 195
Query: 686 G 688
G
Sbjct: 196 G 196
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 389
T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 57 TTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 527 VVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNRRRIQRKG 688
+V D ++++ KTK+ L +L ++ +VY+ +R RAG GK R R I+RKG
Sbjct: 154 IVVDGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKG 206
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 39.5 bits (88), Expect = 0.075
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 389
TSA S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 69 TSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
Score = 36.7 bits (81), Expect = 0.53
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 491 RTHY*KIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGXGKMRNR 667
R H LP+V+ V +I+ ++A L + + D+L+ + +R AG GKMR R
Sbjct: 142 RGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGR 201
Query: 668 R 670
R
Sbjct: 202 R 202
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 385 VGANIRPPRHMLPKAP*P 332
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 488 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 387
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 35.9 bits (79), Expect = 0.93
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 231 REQGGWSPTSAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 398
R QGG P A + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 35.9 bits (79), Expect = 0.93
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = +3
Query: 276 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 455
TG ARI R++GGG R G+ RGGR P K + H
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAI 124
Query: 456 XXXXXXXXXQARGHIIE 506
RGHII+
Sbjct: 125 AATASKSTVAGRGHIID 141
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 348 RRHPDRTYGYHHHGHAEFGQQHVR-YP 271
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 291 ARIPRVRGGGTHRSGQGAFGNMCRGG 368
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 231 REQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 371
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 2.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 363 HDTCYRRHPDRTYGYHHHGHAEFG 292
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 375 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 262
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 3.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 363 HDTCYRRHPDRTYGYHHHGHAEFGQQH 283
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 4.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 364 PRHMLPKAP*PDLWVPPPR 308
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 6.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 366 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 286
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_UPI0000383042 Cluster: hypothetical protein Magn03003854;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03003854 - Magnetospirillum
magnetotacticum MS-1
Length = 547
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 207 QELEAALLREQGGWSPTSAESWGTGRAVARIPRVRGGG 320
+E++A L+R GW A G RA+ R+ +VRG G
Sbjct: 420 EEIDARLIRLAEGWGGAGAPLIGLARALLRLAQVRGRG 457
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 372 YVHHD-TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 259
Y H+D Y +H D + HHHG +G H + H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber
DSM 13855|Rep: Sensor protein - Salinibacter ruber
(strain DSM 13855)
Length = 942
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 394 GGAGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLL 504
GG GTV +T +G RP PL+LLAS + + +T+L
Sbjct: 146 GGGGTVLATL-TGPRPETSPLILLASMGTIAVVETVL 181
>UniRef50_Q3WJC1 Cluster: High-affinity nickel-transporter
precursor; n=1; Frankia sp. EAN1pec|Rep: High-affinity
nickel-transporter precursor - Frankia sp. EAN1pec
Length = 543
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 366 HHDTCYRRHPDRTYGY-HHHGHAEFGQQHVRYPMIRHWLVTSLLA 235
HHD P R +G+ H HGH+ G+ HV P+ + SLLA
Sbjct: 402 HHD----HDPSRDHGHAHQHGHSHGGRWHVHPPVTDQPRLRSLLA 442
>UniRef50_A7IHM0 Cluster: Bilirubin oxidase precursor; n=1;
Xanthobacter autotrophicus Py2|Rep: Bilirubin oxidase
precursor - Xanthobacter sp. (strain Py2)
Length = 502
Score = 32.7 bits (71), Expect = 8.6
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -2
Query: 342 HPDRTYGYHHHGHAEFGQQHVRYPMIRHWLVTSLLAHAVGLPRVLGHRNVNIIDQVRTY- 166
HP T YH H H + G Q Y + L+ A GLP G ++ ++ Q R++
Sbjct: 143 HPAATLWYHSHVHGKTGPQ--VYHGLAGLLLVDDPAAPDGLPSDYGVNDIPLVVQDRSFD 200
Query: 165 --GRLEYEREGL 136
GRL Y+ G+
Sbjct: 201 SSGRLVYDISGM 212
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 32.7 bits (71), Expect = 8.6
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 60 RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRFYVQELEAALLREQ 239
R ++G P VG R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG-GVGARRR--GGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 240 GGWSPTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 377
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_Q555C4 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 254
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 342 HPDRTYGYHHHGHAEFGQQHVRYPMIRHWLVTSLLAHAVGLPRVL 208
H +G HHGH FG H + + W V S + H + +VL
Sbjct: 149 HHGHHFGGGHHGH-HFGGHHGHHDAMNDWSVQSKINHLISKKQVL 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,814,054
Number of Sequences: 1657284
Number of extensions: 14209322
Number of successful extensions: 50057
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 46081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49694
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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