Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0954
(847 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 163 4e-39
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 162 1e-38
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 152 1e-35
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 128 2e-28
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 125 2e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 119 1e-25
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 114 2e-24
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 109 6e-23
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 102 1e-20
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 101 3e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 100 4e-20
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 100 5e-20
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 89 1e-16
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 73 1e-11
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 70 6e-11
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 60 9e-08
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 59 2e-07
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 43 0.008
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 41 0.045
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 40 0.059
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.42
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 37 0.55
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 37 0.73
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 36 0.97
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 1.3
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 36 1.3
UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 34 3.9
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 34 3.9
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 34 5.2
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 34 5.2
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 6.8
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 33 6.8
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 33 9.0
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 9.0
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 163 bits (397), Expect = 4e-39
Identities = 92/178 (51%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Frame = +3
Query: 24 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 203
MKLN+SYP TG +++ + K + G C W+ R
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKR---------MAMEVSGECLGDEWKGYVFR 51
Query: 204 IP---DETGRPDKQPCSSSD------SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 356
I D+ G P KQ ++ SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+L
Sbjct: 52 ITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSL 111
Query: 357 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKK 530
VIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R L P KE K
Sbjct: 112 VIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPL-PEKEGK 168
Score = 36.3 bits (80), Expect = 0.97
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2
Query: 509 PAKEGKENAKPRHKAPKIQRLVTPVV 586
P KEGK K + KAPKIQRLVTPVV
Sbjct: 163 PEKEGK---KAKSKAPKIQRLVTPVV 185
Score = 35.1 bits (77), Expect = 2.2
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +1
Query: 661 YAKLLAQRKKXSKVRRQEEI-KRXRSASMRDFQSS 762
YAKLLA+R K +K +R E++ K+ R++S+RD S+
Sbjct: 210 YAKLLAKRAKEAKEKRHEQLMKKRRASSLRDSVSA 244
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 162 bits (393), Expect = 1e-38
Identities = 89/179 (49%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Frame = +3
Query: 24 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 203
MKLN+S+PATG +++ + K +G +
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 IPDETGRPDKQPCSSSDSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 383
P + G SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 384 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPR-KEKKMLNPDIRHL 557
IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L K+ + P I+ L
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRL 179
Score = 115 bits (277), Expect = 1e-24
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +1
Query: 58 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 237
CQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHG 71
Query: 238 RVRLLIQR 261
RVRLL+ +
Sbjct: 72 RVRLLLSK 79
Score = 36.3 bits (80), Expect = 0.97
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2
Query: 524 KENAKPRHKAPKIQRLVTPVV 586
KE KPR KAPKIQRLVTP V
Sbjct: 164 KEGKKPRTKAPKIQRLVTPRV 184
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/30 (60%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = +1
Query: 661 YAKLLAQRKKXSKVRRQEEI-KRXRSASMR 747
YAKLLA+R K +K +RQE+I KR R +S+R
Sbjct: 209 YAKLLAKRMKEAKEKRQEQIAKRRRLSSLR 238
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 152 bits (368), Expect = 1e-35
Identities = 83/169 (49%), Positives = 99/169 (58%)
Frame = +3
Query: 24 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 203
MKLNVS+PATG + + + K +G +
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 204 IPDETGRPDKQPCSSSDSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 383
P + G KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKD 120
Query: 384 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKK 530
IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR L + KK
Sbjct: 121 IPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGKK 169
Score = 122 bits (293), Expect = 2e-26
Identities = 52/67 (77%), Positives = 62/67 (92%)
Frame = +1
Query: 61 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 240
QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQGFPMKQGVLTN+R
Sbjct: 13 QKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTR 72
Query: 241 VRLLIQR 261
VRLL+++
Sbjct: 73 VRLLLKK 79
Score = 38.7 bits (86), Expect = 0.18
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 509 PAKEGKENAKPRHKAPKIQRLVTPVV 586
P K+GK KPR KAPKIQRL+TPVV
Sbjct: 163 PEKDGK---KPRTKAPKIQRLITPVV 185
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 128 bits (309), Expect = 2e-28
Identities = 58/100 (58%), Positives = 74/100 (74%)
Frame = +3
Query: 258 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 437
KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG EIPGLTD V ++LGPKRA
Sbjct: 120 KGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRA 179
Query: 438 SKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLNPDIRHL 557
+KIRKLFNL K DDVR+YV+ R + + + + P I+ L
Sbjct: 180 TKIRKLFNLDKTDDVRKYVIGRAISKNGKNRFIKPKIQRL 219
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +1
Query: 61 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 240
QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQGFPM QGVLTN+R
Sbjct: 54 QKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFPMMQGVLTNNR 113
Query: 241 VRLLIQR 261
VRLL ++
Sbjct: 114 VRLLFKK 120
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 125 bits (301), Expect = 2e-27
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +1
Query: 58 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 237
CQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 238 RVRLL 252
R+RLL
Sbjct: 72 RLRLL 76
Score = 67.3 bits (157), Expect = 5e-10
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Frame = +3
Query: 24 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 203
MKLNVSYPATG ++ + K +E W+ Q R
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKR---------MGQVVEADILGDEWKGYQLR 51
Query: 204 IP---DETGRPDKQPCSSSD-----SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 359
I D+ G P KQ + K HSC+ PR + RK K+VR V+AN+S L LV
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLV 111
Query: 360 IVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 539
+++K P RLGP R+S I K++ L +EDD V+ LQ R +KK N
Sbjct: 112 VLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 158
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 119 bits (286), Expect = 1e-25
Identities = 71/182 (39%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Frame = +3
Query: 24 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 203
MK N+SYP TG + V + S K +G +
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 204 IPDETGRPDKQPCSSSDSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 383
P G K KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA E
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANE 120
Query: 384 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLQPRKEKKMLN-PDIR 551
I GLTD NVPRRLGPKR +K+R+LF K D V++ +++R + KK P I+
Sbjct: 121 IAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKKRQKAPKIQ 180
Query: 552 HL 557
L
Sbjct: 181 RL 182
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 114 bits (275), Expect = 2e-24
Identities = 68/182 (37%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Frame = +3
Query: 24 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 203
MK N+SYP TG + + + + + K +G +
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 204 IPDETGRPDKQPCSSSDSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 383
P + G + S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG E
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAE 120
Query: 384 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLQPRKEKKMLN-PDIR 551
I GLT +PR+LGPKRA+ I+KLF L KEDD +++ V++R + K K P I+
Sbjct: 121 IDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDRTKCPKIQ 180
Query: 552 HL 557
L
Sbjct: 181 RL 182
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 109 bits (263), Expect = 6e-23
Identities = 50/75 (66%), Positives = 59/75 (78%)
Frame = +3
Query: 258 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 437
KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 84 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 143
Query: 438 SKIRKLFNLSKEDDV 482
+K+R+LF K D V
Sbjct: 144 TKLRRLFGFKKADRV 158
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 102 bits (245), Expect = 1e-20
Identities = 44/67 (65%), Positives = 54/67 (80%)
Frame = +1
Query: 58 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 237
CQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQGFPMKQ VLT+
Sbjct: 12 CQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFPMKQDVLTHD 71
Query: 238 RVRLLIQ 258
R+ LL++
Sbjct: 72 RIHLLLR 78
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +3
Query: 378 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKM 533
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + + R ++ R K+M
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRM 131
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 101 bits (241), Expect = 3e-20
Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +3
Query: 261 GHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 440
G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +EI GLT VPRR GPKRAS
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAS 139
Query: 441 KIRKLFNLS-KEDDVRRYVVKRVLQPRK 521
+R +F ++ + D + V+KR ++P K
Sbjct: 140 TLRAMFGITDSKFDASKLVLKREVKPGK 167
Score = 79.8 bits (188), Expect = 8e-14
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = +1
Query: 49 QRACQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVL 228
+ Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQGFPMKQGV+
Sbjct: 9 ENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQGFPMKQGVI 68
Query: 229 TNSRVRLLIQ 258
T R+RLL++
Sbjct: 69 TPRRIRLLLK 78
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 100 bits (240), Expect = 4e-20
Identities = 43/80 (53%), Positives = 64/80 (80%)
Frame = +3
Query: 264 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 443
+ CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI G+T+ +P R GP+RAS
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASH 139
Query: 444 IRKLFNLSKEDDVRRYVVKR 503
RKLFNLS++DDV+++V++R
Sbjct: 140 FRKLFNLSQKDDVKKFVIRR 159
Score = 81.4 bits (192), Expect = 3e-14
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +1
Query: 64 KLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 243
K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GFPM GV TN+RV
Sbjct: 13 KKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTGVATNNRV 72
Query: 244 RLLI 255
RLL+
Sbjct: 73 RLLL 76
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 100 bits (239), Expect = 5e-20
Identities = 47/90 (52%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +3
Query: 291 GERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 470
GER+RK+VRGC++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+
Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Query: 471 EDDVRRYVV-KRVLQPRKEKKMLNPDIRHL 557
+DVR+YVV +RV++ K+ ++ P I+ L
Sbjct: 153 TEDVRKYVVRRRVVKSGKKDRLKAPKIQRL 182
Score = 68.1 bits (159), Expect = 3e-10
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 64 KLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 240
K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK GFPM GVL +SR
Sbjct: 14 KQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSR 73
Query: 241 VRLLIQR 261
V LL++R
Sbjct: 74 VSLLVKR 80
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = +3
Query: 258 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 437
+G CY RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD VP+RL PKRA
Sbjct: 85 QGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRA 144
Query: 438 SKIRKLFNL 464
SKIR+LF L
Sbjct: 145 SKIRRLFGL 153
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +1
Query: 64 KLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 243
K + D K + + RM +E + LG+E+ G R+ GGND QGFPM QGVL + R
Sbjct: 20 KSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGFPMYQGVLKSQRA 79
Query: 244 RLLIQR 261
RLL+++
Sbjct: 80 RLLLRQ 85
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 72.5 bits (170), Expect = 1e-11
Identities = 29/69 (42%), Positives = 48/69 (69%)
Frame = +1
Query: 61 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 240
Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQGFPMK+G+L+ SR
Sbjct: 13 QHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPMKEGILSPSR 72
Query: 241 VRLLIQRAT 267
V++L+++ +
Sbjct: 73 VKILLKKGS 81
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = +3
Query: 255 SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKR 434
S G Y+ ++ GER RKSVRGCIV +SVL + ++ ++ +T+ N + L KR
Sbjct: 81 STGCRGYKMKK-GERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKR 138
Query: 435 ASKIRKLFNLSKEDDVRRYVVK 500
+S +RK+ L+K DD+R++ +K
Sbjct: 139 SSNLRKVLCLTKTDDIRKHYIK 160
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 70.1 bits (164), Expect = 6e-11
Identities = 39/100 (39%), Positives = 57/100 (57%)
Frame = +3
Query: 255 SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKR 434
SKG + YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+ P++
Sbjct: 63 SKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRK 122
Query: 435 ASKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLNPDIRH 554
K+RK+F + E+ ++ +L+ + P IRH
Sbjct: 123 EKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRH 162
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/65 (38%), Positives = 45/65 (69%)
Frame = +1
Query: 67 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 246
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 247 LLIQR 261
L+ +
Sbjct: 60 PLLSK 64
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 59.7 bits (138), Expect = 9e-08
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +3
Query: 258 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 437
K HSC+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+
Sbjct: 25 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 74
Query: 438 SKIRKLFNLSKEDDVRRYVVKRVLQPRKEKKMLN 539
S I K++ L +EDD V+ LQ R +KK N
Sbjct: 75 SNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 58.8 bits (136), Expect = 2e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +1
Query: 58 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 162
CQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 115 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLIQRAT 267
++G E LG KGY LR+ GG+DK GFPMK+ V R + L+ T
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 40.7 bits (91), Expect = 0.045
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 237
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 238 RVRLLI 255
+ R L+
Sbjct: 193 KKRALL 198
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 40.3 bits (90), Expect = 0.059
Identities = 18/77 (23%), Positives = 46/77 (59%)
Frame = +1
Query: 82 DEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLIQR 261
D+ + +++G +E LG+++ + GG+DKQGF +K+ + T R+++ +++
Sbjct: 19 DDEFIEHIIGRKIGDTIEGSILGEDFSRNEFLINGGHDKQGFLLKKNLNTFERLKINVKK 78
Query: 262 ATHVTDRAAMERENVNQ 312
+ + +R+ +R+N+ +
Sbjct: 79 GS-LGNRSHFKRKNLTK 94
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 37.5 bits (83), Expect = 0.42
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Frame = +3
Query: 201 RIPDETGRPDKQP--------CSSSDSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 356
R+P+E G+ + +P C+ + GH+ R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 357 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRKE 524
+ A P RR+GP RA +++ L + +R QP +E
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDLQGPCSDSRSGVPARRRCAQPGQE 164
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 37.1 bits (82), Expect = 0.55
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 118 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLIQRATHVTD 279
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+ R + D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 36.7 bits (81), Expect = 0.73
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Frame = +1
Query: 112 KRMGAEVEADQLG---DEWKGYV------LRVAGGNDKQGFPMKQGVLTNSRVRLLIQRA 264
+R+G E+ A +LG E G L++ GG DK GFPM+ V RV++L+ R
Sbjct: 32 RRIGEEIPASELGLNLSEIFGEEIPADAKLKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
Query: 265 THVTDRAAMER 297
R ER
Sbjct: 92 PGFRPRERGER 102
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 36.3 bits (80), Expect = 0.97
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +1
Query: 52 RACQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 231
RA QK+ E + ++L K++G +V + + D Y L++ GG D+ GFPM+ +
Sbjct: 14 RAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFPMRPDLPG 69
Query: 232 NSRVRLLI 255
+R RLL+
Sbjct: 70 TARRRLLL 77
Score = 33.1 bits (72), Expect = 9.0
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 273 YRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 374
+RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 83 FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +1
Query: 106 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 225
Y K++G ++ ++G + GY L++ GG+D GFPM++ V
Sbjct: 31 YGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 35.9 bits (79), Expect = 1.3
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 210 DETGRPDKQPCSSSDS-----KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 374
D+ GRP ++ SD +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 375 AQEIPGL 395
+ + L
Sbjct: 117 EEPVAEL 123
Score = 33.9 bits (74), Expect = 5.2
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1
Query: 79 VDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLIQ 258
VD F + +GA V+ +G + GY + + GG+D G PM++ V + + +L++
Sbjct: 21 VDGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDVDGSDLMEVLLE 78
Query: 259 RATHVTDRAAMERENV 306
ER+ V
Sbjct: 79 GGAGFNPDEDGERKRV 94
>UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1188
Score = 34.7 bits (76), Expect = 3.0
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 327 VDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 506
++A + A + A+EI P ++ +K +LFN +DD+ + + V
Sbjct: 33 LEAKNIIKAFIQTENDAEEIKSKALNKKPSYWKDQKDNKTDQLFNRKLDDDIELALERDV 92
Query: 507 -LQPRKEKKMLNPDIRHLR 560
QP K+ +LN ++RH +
Sbjct: 93 PKQPEKDNVLLNMELRHAK 111
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 34.3 bits (75), Expect = 3.9
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -2
Query: 255 NQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 151
+++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 177 HEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 34.3 bits (75), Expect = 3.9
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +1
Query: 112 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLIQ 258
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L++
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLK 74
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 33.9 bits (74), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 156 MEGLCTSCRWRQRQARIPDETGRPDKQPCSSSDSKGHSC 272
+ G C +CR R+ + +P + GRP+ C S GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPN---CGRCISSGHTC 41
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 33.9 bits (74), Expect = 5.2
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 112 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLIQRATHVTDRAAM 291
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+ A V M
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLL--AEGVGFHPVM 87
Query: 292 ERENVNQFV 318
E E + +
Sbjct: 88 EGERKRKMI 96
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 354 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 494
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 33.5 bits (73), Expect = 6.8
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 303 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED-- 476
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKDRVF 286
Query: 477 -DVRRYV---VKRVLQPRKEKKMLNPDI 548
++ V VL+ RK +L P+I
Sbjct: 287 LTLKSTVPTGSSSVLRVRKSSHLLEPNI 314
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 33.5 bits (73), Expect = 6.8
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Frame = +1
Query: 112 KRMGAEVEADQL--------GDEWKGYV-LRVAGGNDKQGFPMKQGVLTNSRVRLLIQRA 264
KR+G ++ A +L G E+ V L + GG DK GFPM+ + RVR+L+ +
Sbjct: 32 KRIGDQIPAKELNINLNELFGKEFPEDVKLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
Query: 265 THVTDRAAMER 297
+ ER
Sbjct: 92 PGFRPKEKGER 102
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 33.1 bits (72), Expect = 9.0
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 61 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 240
Q L EV + KLR FYEK M E+ + +E N + F MKQ VL + R
Sbjct: 13 QILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIFSMKQEVLIHFR 61
Query: 241 VRLLIQRATHVTDRAAMERE-NVNQFVDVLLTPIS 342
V LL+ + RE N D + PIS
Sbjct: 62 VHLLLNNLHSYIYKPLRTREMNYTSLQDAVKLPIS 96
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 33.1 bits (72), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 162 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDSKGHS 269
G C RWR ++ + DE G + PC+ D +G S
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRGCS 52
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 9.0
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 229 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 131
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,072,185
Number of Sequences: 1657284
Number of extensions: 15731873
Number of successful extensions: 46584
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 44660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46549
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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