Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0954
(847 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 25 1.00
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 2.3
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 23 3.0
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 23 4.0
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 22 5.3
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 22 5.3
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 22 5.3
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 9.3
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 9.3
AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine 3-mon... 21 9.3
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 9.3
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 9.3
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 24.6 bits (51), Expect = 1.00
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 20 SHEVKRFVPGNGHARSCS 73
+HE+K+ +PG +SCS
Sbjct: 769 NHEIKKVIPGRITQKSCS 786
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 219 GRPDKQPCSSSDSKGHSCYRPRRDGERKRKSVRGCIV 329
GR D P S + SC ++ G R+ C+V
Sbjct: 154 GREDLSPSSLNGYSADSCDSKKKKGPTPRQQEELCLV 190
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -3
Query: 533 HFLFLPWLEHAFDDITTYIIFFAKVEQLTDFGSTFG 426
H+ H F+ + Y ++ A + Q+++ +TFG
Sbjct: 499 HYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 22.6 bits (46), Expect = 4.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 53 GHARSCSKWWT 85
GH SC+++WT
Sbjct: 107 GHETSCTRYWT 117
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 291 HRGAVCNMSGPLNQKTNTAVCQDAL 217
H+GAVC++ NQ N + DAL
Sbjct: 133 HQGAVCHLETRPNQSDNNQL--DAL 155
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -3
Query: 530 FLFLPWLEHAFDDITTYIIFFAKV 459
F+ LP+LEH + +I+F ++
Sbjct: 131 FINLPFLEHNLIRLKNCVIYFNRI 154
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -1
Query: 775 KQFWQSSGNHALKLTACV*SLP--GDAPWXPSF 683
+Q WQ+S H+L C +P D P SF
Sbjct: 181 QQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSF 213
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 231 KQPCSSSDSKGHSCYR 278
+Q +SKG SCYR
Sbjct: 302 RQMYDRGESKGSSCYR 317
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 82 PPLRTTSGMPVAGYETFNFMTAVNP 8
PP + T +P GY F F A NP
Sbjct: 641 PPSKDTIAVPNNGYVIFRF-RADNP 664
>AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 212
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 92 LCSSTTSNNFWHARC 48
LC+S T +NF + +C
Sbjct: 163 LCNSVTFSNFGYKQC 177
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 92 LCSSTTSNNFWHARC 48
LC+S T +NF + +C
Sbjct: 396 LCNSVTFSNFGYKQC 410
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 92 LCSSTTSNNFWHARC 48
LC+S T +NF + +C
Sbjct: 396 LCNSVTFSNFGYKQC 410
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,005
Number of Sequences: 336
Number of extensions: 3778
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -