Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0953
(785 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 60 1e-09
U50069-2|AAB37558.1| 328|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 29 5.0
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 29 5.0
>U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical
protein D2096.8 protein.
Length = 316
Score = 100 bits (239), Expect = 1e-21
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Frame = +3
Query: 480 YRASNGS-QCKGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPISFTLEF 656
Y+A+ KGI DFW R +++E ++EHD PIL L D+ +DP F +EF
Sbjct: 101 YKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASKDPAGFKIEF 160
Query: 657 YFAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPEIILA 773
+FA N YF N VLTK YL+ PD E+PL+F+GP +I A
Sbjct: 161 HFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRA 199
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 513 IPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNT 689
I +FW F N +LS + E E +L L+D++VQ ED S F + F PNEYFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 690 VLTKEYLMKCKPDEESPLEFEGPE 761
V+TK Y ++ + E E E
Sbjct: 137 VITKSYHLQSESPSTEITEIEWKE 160
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 513 IPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNT 689
I +FW F N +LS + E E +L L+D++VQ ED S F + F PNEYFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 690 VLTKEYLMKCKPDEESPLEFEGPE 761
V+TK Y ++ + E E E
Sbjct: 137 VITKSYHLQSESPSTEITEIEWKE 160
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 513 IPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNT 689
I +FW F N +LS + E E +L L+D++VQ ED S F + F PNEYFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 690 VLTKEYLMKCKPDEESPLEFEGPE 761
V+TK Y ++ + E E E
Sbjct: 137 VITKSYHLQSESPSTEITEIEWKE 160
>U50069-2|AAB37558.1| 328|Caenorhabditis elegans Hypothetical
protein C09B9.2 protein.
Length = 328
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 718 HFIKYSLVSTVFVKYSFGAK*NSRVKLMGSSCICTLISCKHF 593
HF+ L+ + F++ SF +K ++ G S + ++ +C HF
Sbjct: 134 HFVLLFLMFSFFLQSSFSSKSRFVEQIFGMSAVSSMSTCAHF 175
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 529 YQKSGIPLHWDPLEA-R*PCHPSFPH 455
++K +PLHWDP A R P PH
Sbjct: 441 HKKQRLPLHWDPRNASRTPSGKKMPH 466
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 529 YQKSGIPLHWDPLEA-R*PCHPSFPH 455
++K +PLHWDP A R P PH
Sbjct: 427 HKKQRLPLHWDPRNASRTPSGKKMPH 452
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 385 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 498
+P RD+ EE LA+ ++ A GE+++ + EP D
Sbjct: 6 DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 529 YQKSGIPLHWDPLEA-R*PCHPSFPH 455
++K +PLHWDP A R P PH
Sbjct: 441 HKKQRLPLHWDPRNASRTPSGKKMPH 466
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 534 IFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS 641
IF V + + + + P+L L ++V H+DP S
Sbjct: 1145 IFEQVRLEKDRLPANSYPVLSKLSTVRVSQHDDPTS 1180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,212,413
Number of Sequences: 27780
Number of extensions: 355758
Number of successful extensions: 1045
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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