Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0949
         (810 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015401-1|AAH15401.1|  335|Homo sapiens transcriptional adaptor...    77   6e-14
AL009182-1|CAI22772.1|  335|Homo sapiens transcriptional adaptor...    77   6e-14
AL008639-1|CAI23577.1|  335|Homo sapiens transcriptional adaptor...    77   6e-14

>BC015401-1|AAH15401.1|  335|Homo sapiens transcriptional adaptor 1
           (HFI1 homolog, yeast)-like protein.
          Length = 335

 Score = 77.4 bits (182), Expect = 6e-14
 Identities = 33/69 (47%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   LNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEFLLALL 181
           L  A++ L+E LG+   +Y+  +KLWF+ K++KEEFD EA +LL+ D VH HN+FLLA+L
Sbjct: 8   LEAAKKNLSEALGDNVKQYWANLKLWFKQKISKEEFDLEAHRLLTQDNVHSHNDFLLAIL 67

Query: 182 NKVEGLAET 208
            + + L  T
Sbjct: 68  TRCQILVST 76



 Score = 31.5 bits (68), Expect = 3.7
 Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 507 QNVISAVLAQRKGYKTHGKYFMYDIGGDM-PNMWLRNSAKLYD 632
           ++++++V+++RK Y+    +F Y  G ++ P  +L+NS   Y+
Sbjct: 184 KDILTSVVSRRKAYRLRDGHFKYAFGSNVTPQPYLKNSVVAYN 226


>AL009182-1|CAI22772.1|  335|Homo sapiens transcriptional adaptor 1
           (HFI1 homolog, yeast)-like protein.
          Length = 335

 Score = 77.4 bits (182), Expect = 6e-14
 Identities = 33/69 (47%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   LNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEFLLALL 181
           L  A++ L+E LG+   +Y+  +KLWF+ K++KEEFD EA +LL+ D VH HN+FLLA+L
Sbjct: 8   LEAAKKNLSEALGDNVKQYWANLKLWFKQKISKEEFDLEAHRLLTQDNVHSHNDFLLAIL 67

Query: 182 NKVEGLAET 208
            + + L  T
Sbjct: 68  TRCQILVST 76



 Score = 31.5 bits (68), Expect = 3.7
 Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 507 QNVISAVLAQRKGYKTHGKYFMYDIGGDM-PNMWLRNSAKLYD 632
           ++++++V+++RK Y+    +F Y  G ++ P  +L+NS   Y+
Sbjct: 184 KDILTSVVSRRKAYRLRDGHFKYAFGSNVTPQPYLKNSVVAYN 226


>AL008639-1|CAI23577.1|  335|Homo sapiens transcriptional adaptor 1
           (HFI1 homolog, yeast)-like protein.
          Length = 335

 Score = 77.4 bits (182), Expect = 6e-14
 Identities = 33/69 (47%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   LNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEFLLALL 181
           L  A++ L+E LG+   +Y+  +KLWF+ K++KEEFD EA +LL+ D VH HN+FLLA+L
Sbjct: 8   LEAAKKNLSEALGDNVKQYWANLKLWFKQKISKEEFDLEAHRLLTQDNVHSHNDFLLAIL 67

Query: 182 NKVEGLAET 208
            + + L  T
Sbjct: 68  TRCQILVST 76



 Score = 31.5 bits (68), Expect = 3.7
 Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 507 QNVISAVLAQRKGYKTHGKYFMYDIGGDM-PNMWLRNSAKLYD 632
           ++++++V+++RK Y+    +F Y  G ++ P  +L+NS   Y+
Sbjct: 184 KDILTSVVSRRKAYRLRDGHFKYAFGSNVTPQPYLKNSVVAYN 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,050,480
Number of Sequences: 237096
Number of extensions: 2506250
Number of successful extensions: 13389
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13389
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)