Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0949
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001603-1|AAN71358.1|  339|Drosophila melanogaster RE30472p pro...    76   7e-14
BT015976-1|AAV36861.1|  308|Drosophila melanogaster RE72529p pro...    75   2e-13
AE014134-2127|AAN10796.1|  308|Drosophila melanogaster CG31865-P...    75   2e-13
AE014134-2124|AAN10793.1|  308|Drosophila melanogaster CG31866-P...    75   2e-13

>BT001603-1|AAN71358.1|  339|Drosophila melanogaster RE30472p
           protein.
          Length = 339

 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
 Frame = +2

Query: 35  LGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEFLLALLNKVEGLAETSI 214
           LG+   +Y   MK WFR + TKEEFD E+RK+L+ D++H HN+FLLALLNK++  A    
Sbjct: 48  LGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQFLLALLNKIDAFAPLEN 107

Query: 215 TIA-QEKANSHNRNIG 259
             A Q  ++S NR+ G
Sbjct: 108 PPAVQTSSSSGNRSKG 123



 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 15/71 (21%)
 Frame = +1

Query: 283 SEKSNFEPVDILEYLPPNS-----PP---GAGSD-------GVKYATQEIFLPDHALVVG 417
           +E+ NFE  D+L+++  ++     PP   G  SD         +Y  QE+FLPD   ++G
Sbjct: 132 AERLNFELSDVLDFVAEDNMQIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMG 191

Query: 418 RFMLAAWELGL 450
           RF++ AWE+GL
Sbjct: 192 RFLIGAWEIGL 202


>BT015976-1|AAV36861.1|  308|Drosophila melanogaster RE72529p
           protein.
          Length = 308

 Score = 74.5 bits (175), Expect = 2e-13
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = +2

Query: 35  LGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEFLLALLNKVEGLAETSI 214
           LG+   +Y   MK WFR + TKEEFD E+RK+L+ D++H HN+FLLALLNK++  A    
Sbjct: 17  LGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQFLLALLNKIDAFAPLEN 76

Query: 215 TIA-QEKANSHNRN 253
             A Q  ++S NR+
Sbjct: 77  PPAVQTSSSSGNRS 90



 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 15/71 (21%)
 Frame = +1

Query: 283 SEKSNFEPVDILEYLPPNS-----PP---GAGSD-------GVKYATQEIFLPDHALVVG 417
           +E+ NFE  D+L+++  ++     PP   G  SD         +Y  QE+FLPD   ++G
Sbjct: 101 AERLNFELSDVLDFVAEDNMQIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMG 160

Query: 418 RFMLAAWELGL 450
           RF++ AWE+GL
Sbjct: 161 RFLIGAWEIGL 171


>AE014134-2127|AAN10796.1|  308|Drosophila melanogaster CG31865-PA
           protein.
          Length = 308

 Score = 74.5 bits (175), Expect = 2e-13
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = +2

Query: 35  LGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEFLLALLNKVEGLAETSI 214
           LG+   +Y   MK WFR + TKEEFD E+RK+L+ D++H HN+FLLALLNK++  A    
Sbjct: 17  LGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQFLLALLNKIDAFAPLEN 76

Query: 215 TIA-QEKANSHNRN 253
             A Q  ++S NR+
Sbjct: 77  PPAVQTSSSSGNRS 90



 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 15/71 (21%)
 Frame = +1

Query: 283 SEKSNFEPVDILEYLPPNS-----PP---GAGSD-------GVKYATQEIFLPDHALVVG 417
           +E+ NFE  D+L+++  ++     PP   G  SD         +Y  QE+FLPD   ++G
Sbjct: 101 AERLNFELSDVLDFVAEDNMQIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMG 160

Query: 418 RFMLAAWELGL 450
           RF++ AWE+GL
Sbjct: 161 RFLIGAWEIGL 171


>AE014134-2124|AAN10793.1|  308|Drosophila melanogaster CG31866-PA
           protein.
          Length = 308

 Score = 74.5 bits (175), Expect = 2e-13
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = +2

Query: 35  LGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEFLLALLNKVEGLAETSI 214
           LG+   +Y   MK WFR + TKEEFD E+RK+L+ D++H HN+FLLALLNK++  A    
Sbjct: 17  LGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQFLLALLNKIDAFAPLEN 76

Query: 215 TIA-QEKANSHNRN 253
             A Q  ++S NR+
Sbjct: 77  PPAVQTSSSSGNRS 90



 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 15/71 (21%)
 Frame = +1

Query: 283 SEKSNFEPVDILEYLPPNS-----PP---GAGSD-------GVKYATQEIFLPDHALVVG 417
           +E+ NFE  D+L+++  ++     PP   G  SD         +Y  QE+FLPD   ++G
Sbjct: 101 AERLNFELSDVLDFVAEDNMQIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMG 160

Query: 418 RFMLAAWELGL 450
           RF++ AWE+GL
Sbjct: 161 RFLIGAWEIGL 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,460,681
Number of Sequences: 53049
Number of extensions: 778138
Number of successful extensions: 2109
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)