Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0949
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-7|CAB02283.2|  262|Caenorhabditis elegans Hypothetical pr...    33   0.32 
Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z50874-5|CAA90764.1|  305|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    28   6.9  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     28   6.9  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     28   6.9  
Z68342-3|CAA92773.1|  751|Caenorhabditis elegans Hypothetical pr...    28   9.1  
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z80216-7|CAB02283.2|  262|Caenorhabditis elegans Hypothetical
           protein F10G8.7 protein.
          Length = 262

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 755 FGALQAISKTAECSISSIVG-GHLGTEGIHSIIYIYPSP 642
           FG LQAIS  +E SIS+  G G +  + +HS ++   SP
Sbjct: 220 FGTLQAISTASETSISACPGVGPIKAKNLHSFLHAIISP 258


>Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical
           protein C33D9.6 protein.
          Length = 485

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
 Frame = +2

Query: 5   NIARRKLNEVLGEKSTKYFNQMKLW-FRMKLTK---EEFDGEARKLLSNDQVHF---HNE 163
           N  +R     L +    +   ++ W  R +LTK   +E   +A    +NDQ++    HN+
Sbjct: 89  NPIQRPFYSNLDDNVPSFLRNLQKWRLRDELTKSIEQEEKLKAELKHANDQINMIVEHNK 148

Query: 164 FLLALLNKVEGLAETSITIAQEKANSHNRNIGDIREALEPLRRV--TLNQLIYLSICRLI 337
             L  LNK+   A+    I +E      + + D+   LE   +      +  Y + C+L 
Sbjct: 149 LELDALNKINLEAKAQEKIQEEIIQRCMKRVEDLESILETKEQKLNDFEEREYETTCQLT 208

Query: 338 --HHLELA 355
             H LELA
Sbjct: 209 MKHSLELA 216


>Z50874-5|CAA90764.1|  305|Caenorhabditis elegans Hypothetical
           protein R10E4.3 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 224 QEKANSHNRNIGDIREALEPLRRVTLNQLIYLSICRLIHH 343
           +EK     R   +  +AL+ L RVT N  I L + R++HH
Sbjct: 172 EEKEKKKKRKTKERMDALDELTRVTSNDRIPL-LSRIVHH 210


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 202 RNFDYNSPRES*FTXXXXXXXXXXXXTSEKSNFEPVDIL--EYLPPNSPPGAGSDGVKYA 375
           RN +  SPR + F              +E+S  EP+  +  E   P +PP   S G   A
Sbjct: 247 RNIEILSPRSATFEQFVLEGRHYLTFINERSRVEPISFVAEELQRPTTPPKTSSSGTSGA 306

Query: 376 TQ 381
            +
Sbjct: 307 KE 308


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 202 RNFDYNSPRES*FTXXXXXXXXXXXXTSEKSNFEPVDIL--EYLPPNSPPGAGSDGVKYA 375
           RN +  SPR + F              +E+S  EP+  +  E   P +PP   S G   A
Sbjct: 189 RNIEILSPRSATFEQFVLEGRHYLTFINERSRVEPISFVAEELQRPTTPPKTSSSGTSGA 248

Query: 376 TQ 381
            +
Sbjct: 249 KE 250


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 202 RNFDYNSPRES*FTXXXXXXXXXXXXTSEKSNFEPVDIL--EYLPPNSPPGAGSDGVKYA 375
           RN +  SPR + F              +E+S  EP+  +  E   P +PP   S G   A
Sbjct: 371 RNIEILSPRSATFEQFVLEGRHYLTFINERSRVEPISFVAEELQRPTTPPKTSSSGTSGA 430

Query: 376 TQ 381
            +
Sbjct: 431 KE 432


>Z68342-3|CAA92773.1|  751|Caenorhabditis elegans Hypothetical
           protein F38E11.4 protein.
          Length = 751

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 714 HFINCRRTSGNRGNPLHHLHLPFPNSED 631
           HF +CR++  N       LH+PFP  +D
Sbjct: 541 HFSSCRQSFSNTS--FAELHIPFPTEDD 566


>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
           protein F54F2.1 protein.
          Length = 1226

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 679 SVPRCPPTIDEMEHSAVFEIACSAPNP 759
           S P C PT DE +    +  AC   NP
Sbjct: 717 SAPACSPTSDEPDSDGKWTFACDLGNP 743


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,247,766
Number of Sequences: 27780
Number of extensions: 390964
Number of successful extensions: 1057
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)