Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0947
(564 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.53
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.92
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 24 0.92
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 4.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 4.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.53
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 246 SVMYNVAVPNS*SFMRSFVDGDCSNTPSAGSAKLLDTTTIVVLQY 112
+V +NV + R +V GD N P G+A T ++VL +
Sbjct: 307 NVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF--TAQVIVLNH 349
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.92
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 246 SVMYNVAVPNS*SFMRSFVDGDCSNTPSAGSAKLLDTTTIVVLQY 112
+V +NV + R +V GD N P G+A T ++VL +
Sbjct: 307 NVGFNVKNISVKELRRGYVAGDSKNQPPRGAADF--TAQVIVLNH 349
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 24.2 bits (50), Expect = 0.92
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 246 SVMYNVAVPNS*SFMRSFVDGDCSNTPSAGSAKLLDTTTIVVLQY 112
+V +NV + R +V GD N P G+A T ++VL +
Sbjct: 18 NVGFNVKNISVKELRRGYVAGDSKNQPPRGAADF--TAQVIVLNH 60
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 299 PSIYSIQAYLYMRYNANHPLPCTW 370
PS+ S+ AYL P+ +W
Sbjct: 229 PSLTSLNAYLIKNQTITCPIKVSW 252
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 299 PSIYSIQAYLYMRYNANHPLPCTW 370
PS+ S+ AYL P+ +W
Sbjct: 229 PSLTSLNAYLIKNQTITCPIKVSW 252
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 299 PSIYSIQAYLYMRYNANHPLPCTW 370
PS+ S+ AYL P+ +W
Sbjct: 280 PSLTSLNAYLIKNQTITCPIKVSW 303
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 299 PSIYSIQAYLYMRYNANHPLPCTW 370
PS+ S+ AYL P+ +W
Sbjct: 229 PSLTSLNAYLIKNQTITCPIKVSW 252
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 167 RFIPPNAYRLRPPLNP 182
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 167 RFIPPNAYRLRPPLNP 182
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 152 RFIPPNAYRLRPPLNP 167
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 152 RFIPPNAYRLRPPLNP 167
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 152 RFIPPNAYRLRPPLNP 167
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 152 RFIPPNAYRLRPPLNP 167
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 152 RFIPPNAYRLRPPLNP 167
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 152 RFIPPNAYRLRPPLNP 167
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 164 RFIPPNAYRLRPPLNP 179
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 164 RFIPPNAYRLRPPLNP 179
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 478 RFIPENENELQPCIRP 525
RFIP N L+P + P
Sbjct: 392 RFIPPNAYRLRPPLNP 407
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,414
Number of Sequences: 438
Number of extensions: 3376
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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