Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0944
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 69 7e-13
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 62 8e-11
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 61 2e-10
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 49 8e-07
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 42 9e-05
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 35 0.010
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 33 0.030
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 31 0.16
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 28 1.5
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 27 3.5
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 26 4.6
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 26 6.1
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 26 6.1
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 26 6.1
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 8.0
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 8.0
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 25 8.0
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 68.9 bits (161), Expect = 7e-13
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Frame = +3
Query: 255 EAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL 434
E V + ++E V R +FIT+K+ H + +A+N+SL+KLG DY+DLYL+H PI
Sbjct: 58 EEVGVALKEANVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPI-- 112
Query: 435 NADYSHSDVDFMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALSNLMLFK*RVTS 614
+ + E W+ +E A G + + K + + +
Sbjct: 113 --PFYEKKIPISEGWKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHP 170
Query: 615 KTFQ--KEMVEFCQSESVVVMGYSP 683
+ ++ K +VEFCQS+ ++V GY P
Sbjct: 171 QVYKAAKPLVEFCQSKGIIVEGYGP 195
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 97 MPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIG 255
+PA G+GT L + G + ++ + D V A+ G+ H D A VY E+E+G
Sbjct: 12 VPAYGVGTALFKKEKGEI---NRTIVDSVKNALAAGFIHIDCAEVYGNEEEVG 61
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGHLQ 616
G+V +G+SNF LE +LK TI P QIE H Q
Sbjct: 135 GLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQ 171
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 62.1 bits (144), Expect = 8e-11
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Frame = +3
Query: 273 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL------ 434
+ E V R DI++T+KLW HR V A+ +L+ L L+YID YL+HWP L
Sbjct: 69 IRESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 435 -----NADYSHSDVDFMETWRGLEDAQRMG 509
+ + DV ETW+ +E+ G
Sbjct: 129 LPRNEKGELIYEDVPIEETWQAMEELLETG 158
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 85 NGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGK 258
NG +P+IGLGT+ +S + ++ V A+ GYRH DTA +Y E+EIG+
Sbjct: 19 NGDKIPSIGLGTW---------RSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGE 67
Score = 38.7 bits (86), Expect = 8e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGH 610
G V+ IG+SNFN + L+RVLK +KP Q+E H
Sbjct: 158 GKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMELH 192
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 60.9 bits (141), Expect = 2e-10
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Frame = +3
Query: 273 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNA--DY 446
++E V R+DI++T+KLW H V +A+ +LK L LDY+D YL+HWP+ D
Sbjct: 70 IKESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDK 129
Query: 447 SHSDVD---------FMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALSNLMLFK 599
D D ETW+ +E G ++ ++ K A + +
Sbjct: 130 FPKDKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAVHQ 189
Query: 600 *RVTSKTFQKEMVEFCQSESVVVMGYSPF 686
+ Q E VE + + V YSPF
Sbjct: 190 MELHPFLPQTEFVEKHKKLGIHVTAYSPF 218
Score = 42.3 bits (95), Expect = 7e-05
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 85 NGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIG 255
+G +P +GLGT+ +S+ Q ++ V A+ GYRH D A++Y E E+G
Sbjct: 20 DGSKIPGLGLGTW---------RSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVG 67
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 48.8 bits (111), Expect = 8e-07
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +3
Query: 258 AVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLN 437
A+ +EE KREDI+ T+KL + ++ ++ +I+ S+K GL YIDL+L+H P G
Sbjct: 59 AILKFMEETGTKREDIWFTSKLNDLSGYKSTLS-SIDASVKACGLGYIDLFLLHSPYG-- 115
Query: 438 ADYSHSDVDFMETWRGLEDAQRMG*LKA 521
D +E+W+ LE G L+A
Sbjct: 116 --------DRIESWKALEKGVEEGKLRA 135
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 73 LKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEI 252
+K+NNG P G+Y+ V ++K D V A+ GYRH D+A +Y E +
Sbjct: 6 VKLNNGLKCPQFAYGSYM------VNRTK---CFDSVYAALQCGYRHIDSAQMYHNEADC 56
Query: 253 GK 258
G+
Sbjct: 57 GR 58
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 41.9 bits (94), Expect = 9e-05
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +1
Query: 52 STMEVPSLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASV 231
S E ++ + NG +P IG G ++ K + +V +A+D GYRH DTA+V
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFM---------LKYNECYGLVTQALDSGYRHIDTAAV 54
Query: 232 YETEQEIGK 258
Y E GK
Sbjct: 55 YGNEDICGK 63
Score = 39.5 bits (88), Expect = 5e-04
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Frame = +3
Query: 276 EEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHS 455
E+ VKR DIF+T+KL N + A AI SL LG YIDL+L+ P G
Sbjct: 70 EKNNVKRTDIFLTSKLANCSDYYSTRA-AIRSSLHHLG-TYIDLFLIQSPAG-------G 120
Query: 456 DVDFMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALSNLMLFK--*RVTSKTF-- 623
+ +W+ +E+ G +++ + ++ + + SN + ++ F
Sbjct: 121 KKSRIASWKAMEEFVDSGDIRS---VGVSNYGVKHLQELYASNPKFYPCVNQIELHPFLS 177
Query: 624 QKEMVEFCQSESVVVMGYSP 683
Q ++V++CQS + + YSP
Sbjct: 178 QDDIVKYCQSHDIAIEAYSP 197
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.1 bits (77), Expect = 0.010
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 315 TKLWNTQH-RRTEVAQAINDSLKKLGLDYIDLYLMHWP 425
TKL NT R + + +N SLK+LGL Y+D+ + H P
Sbjct: 102 TKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 85 NGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVY 234
+G + A LG +L + G K + + +A D+G FDTA +Y
Sbjct: 21 SGLKVSAFSLGGWLTYGNEGYDVEHTK---NCLKQAWDLGINTFDTAEIY 67
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 33.5 bits (73), Expect = 0.030
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 288 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMH---WPI 428
+KREDI + TK+ ++ +A+ SL++ G +D+ L+H WP+
Sbjct: 67 IKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVLIHSPKWPV 116
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIE 604
G + IG+SN+N LE ++ G P Q+E
Sbjct: 132 GRINKIGVSNYNIHHLEEIISLGLPLPAINQVE 164
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = +3
Query: 291 KREDIFITTKLWNTQHRRTE----------VAQAINDSLKKLGLDYIDLYLMH 419
+R++IF+ TK ++ T + +A++ SLK+LG+D IDLY +H
Sbjct: 74 RRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 315 TKLWNTQHRRTEVAQ-AINDSLKKLGLDYIDLYLMHW 422
+K + T +RR+E+ Q +++ KKL +D+Y +HW
Sbjct: 125 SKEYLTAYRRSELLQNKLHEYQKKLITRVLDMYQLHW 161
>SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 112
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 325 HSLVVIKISSLLTTPSSTFIFTASQFLVQF 236
H L+V ++ + T+ FIFT S FL+ F
Sbjct: 72 HMLLVQRLKRVSTSSRRLFIFTLSMFLIAF 101
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 272 LHLHGFPISCSVS 234
LHLH +P+ CSVS
Sbjct: 535 LHLHAYPVICSVS 547
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 315 TKLWNTQHRRTEVAQAINDSLKKLGLDYID 404
TK+WN H+ E + ++D++++ L +D
Sbjct: 680 TKIWNCVHQLLEREKKMSDAMRQTKLTIVD 709
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 148 VKSKDKQLRDVVMRAIDVGYRHFDTASVYE---TEQEIGK 258
V ++++ ++ A D G R FDTA+ Y +E+ +GK
Sbjct: 39 VLEDEEEVFKIMKAAYDAGIRTFDTANCYSAGVSEELVGK 78
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 558 LSNCCLLKLD-SPMPLTIPFAEHLPILARSP*SLRPNDYNRHLIQW 424
L CC+L S +PF PIL SP S + DY + +I+W
Sbjct: 236 LELCCILDNHWSASQPPLPF----PILFLSPTSTKTIDYAKSMIEW 277
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 467 HGDLARIGRCSANGIVKGIGLSN 535
H D++++ R A+ +KGIGL++
Sbjct: 8 HNDVSKLERIGAHSHIKGIGLND 30
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 441 RHLIQWASASNKDLYNPDLVSSV 373
+HL +W S+S LY+P L S V
Sbjct: 1780 QHLARWISSSKSYLYSPLLSSHV 1802
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 223 RYRNDGIRHLWRALQHHGAACPWTSLRRSDQ 131
RYRN ++ H G+ PW+S+ R ++
Sbjct: 113 RYRNGASVSRSSSIGHSGSTAPWSSVGRHNR 143
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 453 NDYNRHLIQWASASNKDL 400
NDYN+ L +W + N DL
Sbjct: 57 NDYNKRLDEWITIDNIDL 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,940,533
Number of Sequences: 5004
Number of extensions: 59364
Number of successful extensions: 184
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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