Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0944
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 98 6e-21
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 98 6e-21
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 77 1e-14
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 36 0.021
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 35 0.050
Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 5.7
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 28 7.5
U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine rece... 28 7.5
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024755-5|AAK84601.1| 153|Caenorhabditis elegans Hypothetical ... 28 7.5
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 97.9 bits (233), Expect = 6e-21
Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Frame = +3
Query: 255 EAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW---- 422
EA+K ++EG VKRE++FIT+K+WNT H + + I+ L L L Y+DL L+HW
Sbjct: 57 EALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGY 116
Query: 423 -------PIGLNADYSHSDVDFMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALS 581
P G N +SDVD++ETW+ E AQ+ G ++ T S + A
Sbjct: 117 AEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEV 176
Query: 582 NLMLFK*RVTSKTFQKEMVEFCQSESVVVMGYSPFRFPG 698
+ + Q ++ EFC+ + +VV+GYSP PG
Sbjct: 177 KPACLQVELHPYFTQVKLREFCKEKGIVVVGYSPLGNPG 215
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +1
Query: 64 VPSLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETE 243
V SLK+N+G +PAIGLGT+ +SK ++ + A+ GYRH D A VY+ +
Sbjct: 2 VQSLKLNSGYSIPAIGLGTW---------QSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQ 52
Query: 244 QEIGK 258
+E+G+
Sbjct: 53 KEVGE 57
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 97.9 bits (233), Expect = 6e-21
Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Frame = +3
Query: 255 EAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW---- 422
EA+K ++EG VKRE++FIT+K+WNT H + + I+ L L L Y+DL L+HW
Sbjct: 57 EALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGY 116
Query: 423 -------PIGLNADYSHSDVDFMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALS 581
P G N +SDVD++ETW+ E AQ+ G ++ T S + A
Sbjct: 117 AEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEV 176
Query: 582 NLMLFK*RVTSKTFQKEMVEFCQSESVVVMGYSPFRFPG 698
+ + Q ++ EFC+ + +VV+GYSP PG
Sbjct: 177 KPACLQVELHPYFTQVKLREFCKEKGIVVVGYSPLGNPG 215
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +1
Query: 64 VPSLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETE 243
V SLK+N+G +PAIGLGT+ +SK ++ + A+ GYRH D A VY+ +
Sbjct: 2 VQSLKLNSGYSIPAIGLGTW---------QSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQ 52
Query: 244 QEIGK 258
+E+G+
Sbjct: 53 KEVGE 57
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 79.0 bits (186), Expect = 3e-15
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = +3
Query: 258 AVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLN 437
A+K +EEGVVKRE++FITTK W + ++ + +SLKKL L+Y+DLYL H P N
Sbjct: 61 AIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFN 120
Query: 438 ADYS-HSDVDFMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALSNLMLFK*RVTS 614
D S H + WR + + G KA + L+ + + +
Sbjct: 121 DDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHL 180
Query: 615 KTFQKEMVEFCQSESVVVMGYSPFRFPG 698
Q + V+FC+ ++ V Y+ PG
Sbjct: 181 YFPQHDHVDFCKKHNISVTSYATLGSPG 208
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +1
Query: 70 SLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 249
S+K++NG MP IGLGT+ +S ++ V A+ GYR DTASVY+ E+
Sbjct: 7 SIKLSNGVEMPVIGLGTW---------QSSPAEVITAVKTAVKAGYRLIDTASVYQNEEA 57
Query: 250 IG 255
IG
Sbjct: 58 IG 59
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGHL 613
G+ K +G+SN+N Q+ R L G Q+E HL
Sbjct: 145 GLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHL 180
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 77.0 bits (181), Expect = 1e-14
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Frame = +3
Query: 288 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI------------- 428
V+RE++F+++K+WNT H R Q I++ L+ Y+DL ++HWP
Sbjct: 70 VRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPGERGL 129
Query: 429 ---GLNADYSHSDVDFMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALSNLMLFK 599
G N +SDVD++ETW+ LEDA R G +++ K L + +
Sbjct: 130 WPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVLQ 189
Query: 600 *RVTSKTFQKEMVEFCQSESVVVMGYSPFRFPG 698
+ Q+E+ +FC+ + +++ + PG
Sbjct: 190 VEMNPFLDQEEIRQFCREKGIILTAFMLTGNPG 222
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +1
Query: 70 SLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 249
++ +N+G MP IG GT+ +N + ++RD A++ GYRH D+A ++ ++E
Sbjct: 6 TVTLNSGYEMPVIGYGTWQ-LPKNLAAE----RVRD----ALEAGYRHIDSALSFKNQEE 56
Query: 250 I 252
+
Sbjct: 57 V 57
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 279 EGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYS-HS 455
EG++KREDIFITTK + + V +A+ +SLK+L LDY+DLYL H P D S S
Sbjct: 68 EGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDGSFRS 127
Query: 456 DVDFMETWRGLEDAQRMG*LKA 521
DV + WRG E +G KA
Sbjct: 128 DVKVEDIWRGFEKVYGLGLTKA 149
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 61 EVPSLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYET 240
+VP ++NG MP+IGLGT+ + G + V+ A+ GYRH DTA++Y+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEG---------KTVIRNAVLAGYRHIDTATLYQN 54
Query: 241 EQEIG 255
E +IG
Sbjct: 55 EHQIG 59
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGHL 613
G+ K IG+SNFN+ Q+ R++ + A Q+E HL
Sbjct: 145 GLTKAIGVSNFNESQIVRIMNIQKVPIHASQLELHL 180
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 65.3 bits (152), Expect = 4e-11
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Frame = +3
Query: 273 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL------ 434
+ G +KREDIF+T+KL T H +V + + LK L L+YIDLYL+H P
Sbjct: 65 ISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGS 124
Query: 435 ------NADYSHSDVDFMETWRGLEDAQRMG*LKASDCLTSTSSSWRGC*KKALSNLMLF 596
N + + +++ ++TWR LE + G LKA + + + A
Sbjct: 125 FAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQ 184
Query: 597 K*RVTSKTFQKEMVEFCQSESVVVMGYSPFRFPG 698
+ Q+E+ C+ V V Y+P PG
Sbjct: 185 QVECHIYWPQQELRALCKKLGVTVTAYAPLGSPG 218
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 58 MEVPSLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRA-IDVGYRHFDTASVY 234
M V S+ +N G +P GLGT+ + KD+ V +RA +D GYR DTA +Y
Sbjct: 1 MTVDSIPLNTGAQLPLFGLGTW---------QVKDEAELTVALRAALDAGYRLIDTAHLY 51
Query: 235 ETEQEIGK 258
+ E IGK
Sbjct: 52 QNEHIIGK 59
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGHL 613
G +K +G+SNF+ QL+ + +KP Q+E H+
Sbjct: 155 GKLKALGVSNFSCNQLQALYDAAEVKPANQQVECHI 190
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = +1
Query: 70 SLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 249
S+K+N G P IGLGTY K Q+ V+ A+ GYR FDTA VY E+E
Sbjct: 2 SIKLNTGYDCPLIGLGTY---------KIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKE 52
Query: 250 IG 255
IG
Sbjct: 53 IG 54
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Frame = +3
Query: 255 EAVKMKVEEGVVKREDIFITTKLW-NTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIG 431
+A+++ + + +KREDIFITTK+ NT V + +++SL L YID+YL+H+P
Sbjct: 55 DALEILLPKHNLKREDIFITTKMHPNTVEN---VKKLVDESLSLLKTSYIDMYLIHYP-- 109
Query: 432 LNADYSHSD----VDFMETWRGLEDAQRMG*LKA 521
+ DY D + TW L + + G +++
Sbjct: 110 KSFDYGDQDPMNKTLRIATWNDLWECKNAGKIRS 143
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +1
Query: 76 KMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIG 255
K+ NG+ +P + LGTY ++K QL V A+ VGYR FDTA YE E+++G
Sbjct: 3 KLKNGQEIPKLALGTY---------EAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLG 53
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/92 (26%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Frame = +3
Query: 258 AVKMKVEEGVVKREDIFITTKL--WNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIG 431
A+K + + EDI++T+K+ +++++ + + +N+SL+ L Y+DL L+H+P
Sbjct: 55 ALKTLLPRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRP 114
Query: 432 LNA-DYSHSDVDF-METWRGLEDAQRMG*LKA 521
L+ D + ++ + +TW LE G +++
Sbjct: 115 LDTEDLNENNKMYRKDTWIALEKLHAEGKIRS 146
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 500 ANGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGH 610
A G ++ IG+SN+ +E + TI+P QIE H
Sbjct: 140 AEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIEYH 176
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 288 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWP 425
+KREDI+IT+KL + + ++I +SL L ++Y+DL L+HWP
Sbjct: 67 LKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP 112
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 97 MPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGK 258
MP IG+GT+ K++ LR V+ GYR DTA VY E +IG+
Sbjct: 11 MPLIGIGTWQ--------VQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGR 56
Score = 31.9 bits (69), Expect = 0.46
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Frame = +2
Query: 335 APEN*SSPSYKRFTEETRSGLYRSLFDALA-HWIKCRL*S---FGRRLHGDLARIG-RCS 499
AP N + EE+ S L D L HW L S ++L + +
Sbjct: 79 APSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLRVESWNVMCEMM 138
Query: 500 ANGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGH 610
A G ++ +G+SNF LE + K+ + P Q+E H
Sbjct: 139 AEGKLRSVGVSNFEICHLEELKKDSNVVPAVNQVEYH 175
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 EAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQA-INDSLKKLGLDYIDLYLMHWPIG 431
EA+K+ + + + R D+F+T+K + E + + +SL+ L DYID+YL+H+P
Sbjct: 65 EALKILLPKHGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKP 124
Query: 432 LNADYSHSDVDFME----TWRGLEDAQRMG 509
++D + DV+ E + LE+A+ G
Sbjct: 125 NDSD--NDDVNNAEYRKIAYEVLEEAKAAG 152
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 70 SLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 249
S K+N+G +P +G GTY K + + + A+ GYR FDTA Y E+E
Sbjct: 12 SQKLNSGYNIPFVGFGTY---------KVTGENVPPAIDAALTAGYRMFDTAKYYLNEKE 62
Query: 250 IGK 258
+G+
Sbjct: 63 LGE 65
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 500 ANGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGH 610
A G V+ IG+SN+ LE + + P A Q+E H
Sbjct: 150 AAGKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYH 186
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 324 WNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHS-DVDFMETWRGLEDAQ 500
W + + A+ DSLKKL L+Y+DLYL H P + D S + + WR +
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQKIESSVEDIWRQFDAVY 112
Query: 501 RMG*LKA 521
+ G KA
Sbjct: 113 KAGLAKA 119
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +3
Query: 294 REDIFITTKLWNTQHRRT--EVAQAINDSLKKLGLDYIDLYLMHWP----IGLNADYSHS 455
RED+FITTK+ T + T E + + +SL L DY+DL L+H+P G + DY +
Sbjct: 78 REDVFITTKV-RTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDDDYEIN 136
Query: 456 DVDFMETWRGLEDAQRMG 509
W+ LE A+ G
Sbjct: 137 KSRRKIVWQTLEKAKESG 154
Score = 34.7 bits (76), Expect = 0.066
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 SLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDV-VMRAIDVGYRHFDTASVYETEQ 246
+ K ++G MP IGLG + + + +Q DV + A+ GYR FDTA++Y+ E
Sbjct: 11 AFKFSDGYEMPKIGLG---------ISRIETQQDLDVSIEAALKSGYRQFDTANLYKNET 61
Query: 247 EIG 255
+G
Sbjct: 62 FLG 64
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3
Query: 288 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHSDVDF 467
V RE++F++TKLW EV A S +KL DY+D+Y++H P D+ + +
Sbjct: 64 VPREEMFLSTKLWPVDCG-DEVYNAFQTSCEKLQTDYLDMYMIHMP--QLPDWIVNQKET 120
Query: 468 ME-TWRGLE 491
E TWR +E
Sbjct: 121 KEKTWRQME 129
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 512 VKGIGLSNFNKQQLERVLKEGTIKPDAIQIEGH 610
V+ IG+SN++ + L+ +L+ +I P A Q+E H
Sbjct: 137 VRSIGVSNYSIEDLDELLEFASILPHANQVELH 169
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 VPSLKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAID-VGYRHFDTASVYET 240
+P+ ++N MP IGLGT D V+ +I GYR DTA Y
Sbjct: 2 IPTTVLSNNVEMPLIGLGT----------THSGGYYHDAVLHSIKKCGYRLIDTAKRYGV 51
Query: 241 EQEIG 255
E+++G
Sbjct: 52 EKQLG 56
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 258 AVKMKVEEGVVKREDIFITTKLWN 329
A+K + EGVVKRED+FITTK+ N
Sbjct: 101 AIKEVIAEGVVKREDLFITTKVPN 124
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 73 LKMNNGRXMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEI 252
L ++N MPA+GLGT+ +S + + V A+ GY DTAS Y E+ I
Sbjct: 48 LTLSNAHSMPAVGLGTW---------QSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFI 98
Query: 253 G 255
G
Sbjct: 99 G 99
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 261 VKMKVEEGVVKREDIFITTKLW--NTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL 434
VK + ++ ++ D+ K W N + ++E A++ +L KLG DY+++ L+ P+G
Sbjct: 128 VKKEYDKLQSQKIDVEKDCKTWKSNPKFNQSEDFPALDSNLVKLGKDYVNISLVDVPLGR 187
Query: 435 NADYSHSDVDFMET--WRGLED 494
N + V E W+ + D
Sbjct: 188 NVHLGQAPVTNTEETFWKAVFD 209
>Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical
protein Y57G11C.6 protein.
Length = 482
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 261 VKMKVEEGVVKREDIFITTKLW--NTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL 434
VK + E+ + D+ K W N+++ ++E A++ +L K+ DY+++ + P+G
Sbjct: 185 VKKEFEKLQSMKVDVEKECKTWKANSKYNQSEDFPALDSNLLKVEKDYVNISRVEIPLGR 244
Query: 435 NADYSHSDV-DFMET-WRGLED 494
N V D ET W+ + D
Sbjct: 245 NIYIGQVPVKDTEETFWKAVFD 266
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 175 HGAACPWTSLRRSDQTQGTCPGRWRACXCRCSFLTRALPSLTPAQAPTGTVRGVARTP 2
HG + + +RS Q G ++ AC +C ++A P PA A V +TP
Sbjct: 12 HGTLACFPTSQRSYQ-YGAPTQQFAACTPQCCGCSQAQPGPQPAAAAAARVAAAGKTP 68
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 252 WEAVKMKVEE--GVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWP 425
WEAVK K +E G +K + I ++ + T + +++ + K+G D + + W
Sbjct: 1081 WEAVKQKTKEGGGTIKTKSKAIKDEIVAALEKLTSIDESVAQA--KVGADAAENDMKRWE 1138
Query: 426 IGL-NADYSHSDV-DFMETWRGLEDAQ 500
I + NA +V ++ET G E AQ
Sbjct: 1139 IIIENARREIENVLHYLET-EGEERAQ 1164
>U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 55 protein.
Length = 334
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 476 GLHEVYVRMTIIGI*SNGPVHQIKIYIIQT*FLQ*IVYSLGYFS 345
GL + +T+I S + +K ++I T FLQ I+ SLG+F+
Sbjct: 24 GLTFQLLLLTLILTKSPSILTNLKFFLINTCFLQIILISLGFFT 67
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = -1
Query: 622 NVLEVTLYLNSIRFDSAFFQHPLQLLLVEVRQSDAFNYPIR*ASSNPRQVSMKSTSE 452
NVLEV L L ++ D FF++ L+ + S + P+R A SN ++ K+T E
Sbjct: 527 NVLEVALKLRELKSDQQFFKN-LETASSGIAGSSSSIKPVRDALSNIKK--NKNTGE 580
>AC024755-5|AAK84601.1| 153|Caenorhabditis elegans Hypothetical
protein Y34B4A.5 protein.
Length = 153
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 339 RRTEVAQAINDSLKKLGLDYID--LYLMHWPIGLNADYSHSDVDFMETWRGLEDAQRMG* 512
++T+++ K L DY + +Y + NA + HS + +W G E A++ G
Sbjct: 81 KQTQISDCRATFAKNLLADYKNHCMYFEQYTGCFNALFDHSSCNSESSWWGCEYARQAGR 140
Query: 513 LKASDCLTSTSS 548
DC S+
Sbjct: 141 AVLHDCSLQCST 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,412,922
Number of Sequences: 27780
Number of extensions: 339788
Number of successful extensions: 976
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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