Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0944
         (709 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.53 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.53 
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    25   0.70 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.93 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.7  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 21  RTVPVGAWAGVNDGSALVKNEQRQXHARHR 110
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 21  RTVPVGAWAGVNDGSALVKNEQRQXHARHR 110
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 449 SFGRRLHGDLARIGRCSANGIVKGIGLSNFNKQQLERVLKEGTIK 583
           ++GRR++     +   S   I  G+G+SNF      R  + GTI+
Sbjct: 210 NYGRRINCTYVALYPSSVQVIALGVGVSNFLSS--TRTAETGTIR 252


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 217 RNDGIRHLWRALQHHGAACPWTSLRRSDQTQGTCPG 110
           RN G+ H  +  QH+GAA       +S Q Q    G
Sbjct: 14  RNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAG 49


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -2

Query: 567 FSTLS--NCCLLKLDSPMPLTIPF 502
           FST S  N C++ LD    +T PF
Sbjct: 129 FSTASILNLCVISLDRYWAITDPF 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,557
Number of Sequences: 438
Number of extensions: 4589
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)