Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0940
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   4.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   4.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   4.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   5.4  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    22   5.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.4  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 744 GWRKKTIIMSTGGDFGNREDQDSTIFSXG 830
           G +   +  ST GD G R + DST  + G
Sbjct: 38  GGKPPELTGSTNGDGGARSNADSTSHTDG 66


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 744 GWRKKTIIMSTGGDFGNREDQDSTIFSXG 830
           G +   +  ST GD G R + DST  + G
Sbjct: 194 GGKPPELTGSTNGDGGARSNADSTSHTDG 222


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -2

Query: 757 FLRQPPVGLFNLKGPQEITRVLELFSNSEDLMDEVLNTDNVVFMEPLLNNAVGS 596
           F+    +   NLKG +  T   E F N  +L D  L  +++  ++  + + VGS
Sbjct: 136 FMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGS 189


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 375 PWYQPSFTEVRKVLQLFRLRQINNG 449
           P  QP+    R   +  R++Q+NNG
Sbjct: 80  PQQQPASVARRNARERNRVKQVNNG 104


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 576 LSLANPRLYTNSRTLF 529
           LS A PRL  N+RT+F
Sbjct: 87  LSSAFPRLKRNARTIF 102


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 300 SDFITFLDAVFLDVLSALLKISLFFLM 220
           S F TFL++  +DV    L ISL  ++
Sbjct: 166 SFFKTFLNSCLMDVYYEFLLISLINIL 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,477
Number of Sequences: 336
Number of extensions: 4214
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)